Detailed information NTG0375671

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: G4G26_RS13840
• Genome accession: NZ_CP049924
• Coordinates: 2685961..2687226 (+)
• Length: 421 a.a.
• NCBI ID: WP_014480427.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain So1b
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2680961..2692226

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G4G26_RS13820 (G4G26_13855)	yrrB	2682332..2682952 (-)	621	WP_202926392.1	tetratricopeptide repeat protein	-
G4G26_RS13825 (G4G26_13860)	mnmA	2683038..2684153 (-)	1116	WP_004398509.1	tRNA 2-thiouridine(34) synthase MnmA	-
G4G26_RS13830 (G4G26_13865)	iscSA	2684184..2685323 (-)	1140	WP_033882962.1	cysteine desulfurase family protein	-
G4G26_RS13835 (G4G26_13870)	cymR	2685342..2685758 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
G4G26_RS13840 (G4G26_13875)	rarA	2685961..2687226 (+)	1266	WP_014480427.1	replication-associated recombination protein A	Machinery gene
G4G26_RS13845 (G4G26_13880)	tcdA	2687266..2688030 (-)	765	WP_014480428.1	tRNA threonylcarbamoyladenosine dehydratase	-
G4G26_RS13855 (G4G26_13890)	aspS	2688365..2690143 (-)	1779	WP_015714438.1	aspartate--tRNA ligase	-
G4G26_RS13860 (G4G26_13895)	hisS	2690157..2691431 (-)	1275	WP_014480430.1	histidine--tRNA ligase	-
G4G26_RS13865 (G4G26_13900)	yrzK	2691813..2691983 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46463.29 Da
• Isoelectric Point: 7.2043

>NTDB_id=375671 G4G26_RS13840 WP_014480427.1 2685961..2687226(+) (rarA) [Bacillus subtilis strain So1b]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDSGWVEQQYLPDSLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=375671 G4G26_RS13840 WP_014480427.1 2685961..2687226(+) (rarA) [Bacillus subtilis strain So1b]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGGATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGATCTGATTAAACAGGCACTGGAACGC
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCGATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAAGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGTGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAGCGGTTGGGTCGAACAACAATACCTCCCTGATTCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACAGGAAAATTCGAATCCGCCTTAAAGCAGGTGTATGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.287	100	0.993