Detailed information NTG0037555

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: AAZO_RS01525
• Genome accession: NC_014248
• Coordinates: 324333..325457 (-)
• Length: 374 a.a.
• NCBI ID: WP_013189925.1
• Uniprot ID: D7DZF3
• Organism: 'Nostoc azollae' 0708
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 319333..330457

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AAZO_RS01505 (Aazo_0318)	-	319367..319651 (-)	285	WP_013189921.1	HU family DNA-binding protein	-
AAZO_RS01510 (Aazo_0319)	-	320147..322603 (-)	2457	WP_013189922.1	type IV pilus secretin family protein	-
AAZO_RS01515 (Aazo_0320)	-	322743..323522 (-)	780	WP_013189923.1	GspMb/PilO family protein	-
AAZO_RS01520 (Aazo_0321)	-	323519..324328 (-)	810	WP_013189924.1	PilN domain-containing protein	-
AAZO_RS01525 (Aazo_0322)	pilM	324333..325457 (-)	1125	WP_013189925.1	type IV pilus assembly protein PilM	Machinery gene
AAZO_RS01530 (Aazo_0323)	-	325672..326970 (+)	1299	WP_013189926.1	ABC transporter substrate-binding protein	-
AAZO_RS34745	-	327197..327334 (-)	138	WP_187289578.1	hypothetical protein	-
AAZO_RS01535 (Aazo_0325)	-	327356..328672 (-)	1317	WP_013189928.1	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	-
AAZO_RS01540 (Aazo_0326)	-	328800..328925 (-)	126	WP_013189929.1	photosystem II protein Y	-
AAZO_RS01545 (Aazo_0328)	-	329124..329645 (-)	522	WP_013189931.1	gamma carbonic anhydrase family protein	-
AAZO_RS01550 (Aazo_0329)	-	329885..330397 (+)	513	WP_013189932.1	TIGR02652 family protein	-

Sequence

Protein

• Length: 374 a.a.
• Molecular weight: 41112.47 Da
• Isoelectric Point: 4.5132

>NTDB_id=37555 AAZO_RS01525 WP_013189925.1 324333..325457(-) (pilM) ['Nostoc azollae' 0708]
MVNVLSNLSNLSNILGKSNKGVGIELAPERMNIVHLCKQRQGLKIESLTTIPVPEGIVVDGQINDPPRMAEIIQQGMAES
KIKASRVATCIPGRDAIVRVIPVPAELDNKELREMVLNHEAALYLPYPREEADVDYQKLGYFVDEDGIEKVQVLLVATRK
EITDTYINTFAEAGLKVDVLEINSFALIRTIRDQLRLFGPQEAAVLVDIEFDSTEIAIIINGVPQFSRTVPIGTYQLQAA
LSRAMNLPTSRDMDMLMGMTIPTNSMDVGRTGTTGVNPGMGPMLKILGELSDELRRSIDFYINQSEGLEVAQILLAGTGG
GLQQLDEFFTQRLGFPTTQIDPIRDLSLQVEAEKYPPVQRPGLGIILGLAMREG

Nucleotide

• Length: 1125 bp

>NTDB_id=37555 AAZO_RS01525 WP_013189925.1 324333..325457(-) (pilM) ['Nostoc azollae' 0708]
GTGGTAAACGTCTTAAGCAATCTTAGTAATCTCAGTAATATCCTTGGGAAATCTAATAAAGGTGTTGGCATTGAGCTTGC
ACCAGAACGAATGAATATAGTTCACCTATGTAAGCAACGCCAAGGCTTAAAAATAGAATCTTTGACCACCATACCAGTTC
CAGAGGGGATAGTTGTTGATGGTCAAATTAACGATCCTCCTAGGATGGCGGAAATCATCCAACAGGGAATGGCTGAAAGT
AAAATTAAAGCTTCCCGTGTTGCCACTTGTATCCCCGGACGAGATGCTATTGTGCGTGTGATTCCTGTTCCAGCAGAGTT
GGATAATAAAGAGTTGCGGGAGATGGTGCTTAACCATGAGGCTGCACTATATCTACCCTATCCACGAGAAGAAGCTGATG
TAGATTATCAGAAATTGGGGTATTTTGTGGATGAGGATGGTATTGAAAAAGTACAAGTGCTTTTAGTTGCCACTCGTAAG
GAAATAACAGATACCTATATTAACACTTTTGCTGAAGCAGGATTAAAAGTTGATGTTTTAGAAATTAACAGTTTTGCCCT
GATTCGGACTATTCGAGACCAGTTAAGGCTATTCGGACCCCAAGAAGCCGCTGTATTAGTTGATATCGAGTTTGACAGTA
CTGAAATTGCTATTATTATCAATGGAGTACCACAATTTTCCCGTACAGTACCTATAGGTACATATCAACTGCAAGCAGCT
CTATCAAGGGCAATGAATTTACCCACATCACGAGATATGGATATGTTGATGGGCATGACTATTCCTACAAATTCTATGGA
TGTGGGTAGGACTGGGACTACTGGTGTTAATCCTGGTATGGGACCTATGTTAAAAATACTGGGAGAATTATCAGATGAAC
TGCGTCGTTCTATAGATTTTTACATTAATCAGAGTGAAGGTTTAGAAGTGGCGCAGATTCTACTAGCTGGGACTGGAGGA
GGACTCCAACAGCTAGATGAGTTCTTTACTCAAAGATTAGGTTTTCCTACTACTCAAATAGATCCAATTAGGGATTTGTC
CTTGCAAGTAGAAGCCGAAAAATATCCACCCGTGCAACGTCCTGGATTGGGGATAATACTGGGTTTAGCAATGCGGGAGG
GATAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (23-247)

• Type IV pilus assembly protein PilM; (PilM_2) (289-373)

3D structure

• AlphaFold DB: D7DZF3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Synechocystis sp. PCC 6803	61.853	98.128	0.607