Detailed information NTG0375394

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: FP510_RS01020
• Genome accession: NZ_CP042000
• Coordinates: 163607..164539 (+)
• Length: 310 a.a.
• NCBI ID: WP_000138501.1
• Uniprot ID: -
• Organism: Streptococcus agalactiae strain GBS19
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 158607..169539

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FP510_RS01000 (FP510_01010)	-	158819..160474 (+)	1656	WP_001118749.1	peptide ABC transporter substrate-binding protein	-
FP510_RS01005 (FP510_01015)	-	160593..161507 (+)	915	WP_000598965.1	ABC transporter permease	-
FP510_RS01010 (FP510_01020)	-	161517..162548 (+)	1032	WP_000764052.1	ABC transporter permease	-
FP510_RS01015 (FP510_01025)	oppD	162561..163607 (+)	1047	WP_000410286.1	ABC transporter ATP-binding protein	Regulator
FP510_RS01020 (FP510_01030)	amiF	163607..164539 (+)	933	WP_000138501.1	ABC transporter ATP-binding protein	Regulator

Sequence

Protein

• Length: 310 a.a.
• Molecular weight: 34837.64 Da
• Isoelectric Point: 6.7314

>NTDB_id=375394 FP510_RS01020 WP_000138501.1 163607..164539(+) (amiF) [Streptococcus agalactiae strain GBS19]
MTENRKKLVEVKNVSLTFNKGKANEVRAIDNVSFDIYEGEVFGLVGESGSGKTTVGRSILKLYDISDGEITFNGEVISHL
KGKALHSFRKDAQMIFQDPQASLNGRIKIRDIVAEGLDIHKLAKSKSDRDSKVQALLDLVGLNKDHLTRYPHEFSGGQRQ
RIGIARALAVEPKFIIADEPISALDVSIQAQVVNLMQKLQREQGLTYLFIAHDLSMVKYISDRIGVMHWGKLLEVGTSDD
VYNNPIHPYTKSLLSAIPEPDPESERQRVHQPYNPAIEQDGQERQMHEITPGHFVLSTPQEAEEYKKQIL

Nucleotide

• Length: 933 bp

>NTDB_id=375394 FP510_RS01020 WP_000138501.1 163607..164539(+) (amiF) [Streptococcus agalactiae strain GBS19]
ATGACTGAAAATCGAAAAAAATTAGTTGAAGTCAAAAATGTTTCTTTGACCTTCAATAAAGGAAAAGCTAATGAAGTGAG
AGCAATTGATAATGTTAGTTTTGACATTTATGAAGGTGAAGTGTTTGGATTAGTTGGGGAATCTGGATCAGGAAAGACAA
CCGTTGGACGTTCAATTTTAAAACTTTATGATATTTCTGATGGAGAAATTACCTTTAATGGAGAAGTGATCTCACATCTG
AAAGGTAAAGCATTACATAGTTTTCGTAAAGACGCTCAGATGATTTTTCAGGATCCTCAGGCTAGCTTAAACGGCCGTAT
AAAGATTCGTGATATCGTAGCAGAAGGTTTAGATATACATAAATTAGCTAAATCAAAATCAGATCGTGATAGTAAAGTTC
AGGCCCTATTAGATCTTGTAGGGTTAAATAAAGATCATTTAACACGTTATCCGCATGAATTTTCAGGTGGACAACGACAA
CGTATCGGGATTGCACGTGCTTTAGCAGTAGAGCCTAAATTTATCATTGCTGATGAACCAATATCTGCCTTAGATGTTTC
AATCCAAGCACAAGTTGTTAATTTAATGCAAAAATTGCAAAGAGAACAAGGATTGACTTATTTGTTTATCGCACATGATT
TGTCTATGGTAAAATACATTTCAGATCGTATCGGTGTTATGCATTGGGGGAAACTGTTAGAAGTTGGAACATCTGATGAT
GTTTATAACAATCCAATCCACCCTTATACGAAGAGTCTATTATCAGCTATTCCAGAACCAGATCCGGAGAGTGAACGTCA
ACGTGTTCACCAGCCGTATAATCCAGCTATTGAGCAAGACGGACAAGAACGTCAAATGCACGAGATTACCCCTGGTCATT
TTGTTTTATCTACACCCCAAGAAGCTGAAGAATATAAAAAACAAATATTATAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-267)

• ABC transporter (ABC_tran) (30-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	54.545	99.355	0.542
amiF	Streptococcus thermophilus LMG 18311	54.221	99.355	0.539
amiF	Streptococcus salivarius strain HSISS4	54.426	98.387	0.535