Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   G6536_RS10875 Genome accession   NZ_CP049330
Coordinates   2135516..2137243 (+) Length   575 a.a.
NCBI ID   WP_003182490.1    Uniprot ID   Q65IR1
Organism   Bacillus licheniformis strain CP6     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 2130516..2142243
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  G6536_RS10855 (G6536_11010) - 2131005..2131217 (+) 213 WP_016885413.1 hypothetical protein -
  G6536_RS10860 (G6536_11015) - 2131273..2133201 (-) 1929 WP_009328120.1 di-heme oxidoredictase family protein -
  G6536_RS10865 (G6536_11020) - 2133332..2134906 (+) 1575 WP_003182488.1 alkaline phosphatase family protein -
  G6536_RS10870 (G6536_11025) - 2135046..2135519 (+) 474 WP_009328118.1 MarR family transcriptional regulator -
  G6536_RS10875 (G6536_11030) rcrP 2135516..2137243 (+) 1728 WP_003182490.1 ABC transporter ATP-binding protein Regulator
  G6536_RS10880 (G6536_11035) rcrQ 2137240..2139063 (+) 1824 WP_003182492.1 ABC transporter ATP-binding protein Regulator
  G6536_RS10885 (G6536_11040) - 2139297..2140511 (+) 1215 WP_003182494.1 cytochrome P450 -
  G6536_RS10890 (G6536_11045) - 2140560..2141276 (-) 717 WP_003182496.1 3-ketoacyl-ACP reductase -

Sequence

Protein


Download         Length: 575 a.a.        Molecular weight: 63375.39 Da        Isoelectric Point: 9.5311

>NTDB_id=373573 G6536_RS10875 WP_003182490.1 2135516..2137243(+) (rcrP) [Bacillus licheniformis strain CP6]
MISLLKYLKPYKLQVILVAVFTLLSSVLELYLPTLMADVVDVGIVNSDMPFILKTGGWMIACSLLAIMMTVGKAFFASKT
ALGFGRDIRRKLFVKVEHHSMDEFGKISSASLITRTTNDVKQVQDVLNMMLSLMTRAPLMLVGGIVLAVSRDAKLSIIFL
AALPILAGLIFLITRKAVPLFGVLQKKTDRLNLVLREGLTGVRVIRAFNRVDQEKVRFQKANEEFRDTGIAVNRIMAFLF
PVMMIMMNFTNIAIIWFGGIRIDQGSMQVGNLMAFLQYASMILIALIMLAMTFVMIPRAQASAGRINEVLLTEPSITDPK
EPQKDSGLRGYVEFQNVTFRYAGAEKPVLEDISFKAKPGETTAIIGSTGAGKTTILQLIPRFFDIEKGTVLVNGTDVRKM
AQKELRAKIGYVPQKASIFSGTIKDNIRFGKEDATDEEILEALETAQAAEFVEGKENGIESEIEQAGANLSGGQKQRLSI
ARALVRKPEIYLFDDSFSALDYKTDQKLRKALKKTTADAAVIIVAQRVSTITDADQIIVLNEGKIAGIGTHQQLLAENGI
YQEIVASQQAEEESA

Nucleotide


Download         Length: 1728 bp        

>NTDB_id=373573 G6536_RS10875 WP_003182490.1 2135516..2137243(+) (rcrP) [Bacillus licheniformis strain CP6]
ATGATCTCACTCTTAAAATATTTAAAGCCCTATAAGCTGCAAGTGATTCTCGTCGCTGTTTTTACTTTGCTGAGCAGTGT
GCTTGAGCTTTATTTGCCGACGTTGATGGCTGATGTCGTTGATGTCGGAATCGTAAACAGTGATATGCCATTTATTTTGA
AAACCGGCGGCTGGATGATCGCCTGCTCCCTTCTGGCCATCATGATGACTGTCGGAAAAGCGTTTTTCGCTTCGAAAACA
GCCCTCGGCTTTGGAAGAGATATCAGGCGCAAACTGTTTGTCAAAGTTGAACACCATTCAATGGATGAATTCGGAAAAAT
CAGTTCTGCTTCTCTCATTACCCGTACCACCAATGATGTCAAGCAGGTCCAAGATGTGCTCAACATGATGCTTTCATTGA
TGACGAGAGCGCCGTTAATGCTGGTCGGCGGTATTGTGCTTGCGGTTTCCAGAGATGCCAAGCTGTCGATTATATTTCTG
GCCGCTCTCCCGATACTTGCAGGGCTGATTTTTCTCATTACAAGAAAAGCTGTCCCCTTATTCGGCGTCCTGCAAAAAAA
GACGGATCGTCTCAACCTTGTTCTCAGGGAAGGTTTGACGGGCGTTCGTGTCATTCGCGCGTTTAACCGCGTTGATCAAG
AAAAAGTCCGGTTTCAAAAAGCGAACGAAGAATTTCGCGATACAGGCATCGCCGTCAACAGAATCATGGCTTTTCTATTC
CCTGTCATGATGATTATGATGAATTTCACGAACATCGCGATTATCTGGTTCGGAGGCATCCGCATCGATCAAGGCAGCAT
GCAGGTCGGGAACTTAATGGCTTTCCTTCAATATGCATCGATGATTCTAATTGCGCTGATCATGCTTGCGATGACATTCG
TGATGATCCCAAGGGCTCAGGCATCTGCCGGCCGCATTAATGAAGTGCTGTTAACAGAGCCTTCGATTACCGATCCGAAA
GAGCCGCAGAAAGACAGCGGCTTGCGCGGTTATGTTGAGTTTCAGAATGTGACTTTTCGTTATGCCGGGGCCGAAAAGCC
CGTTCTCGAAGATATCTCGTTCAAGGCAAAGCCGGGTGAGACGACTGCGATCATCGGCAGCACAGGAGCGGGAAAAACGA
CGATTCTTCAATTGATCCCGAGATTTTTCGATATTGAAAAAGGAACTGTGCTAGTCAACGGAACAGATGTCAGAAAGATG
GCGCAAAAGGAGCTTCGCGCGAAAATCGGCTATGTCCCGCAAAAAGCTTCAATATTCAGCGGGACGATTAAAGACAATAT
CCGCTTTGGCAAAGAAGATGCAACAGATGAAGAAATTCTGGAAGCACTTGAAACGGCACAGGCTGCCGAGTTTGTAGAAG
GCAAGGAAAACGGAATTGAATCTGAAATCGAGCAGGCCGGAGCCAATCTTTCAGGCGGCCAGAAACAGCGGCTTTCCATC
GCCAGGGCATTAGTCAGAAAACCGGAAATTTATTTATTTGACGACAGCTTTTCGGCGCTTGATTACAAAACGGATCAAAA
GCTGAGAAAAGCGCTGAAGAAAACAACCGCTGATGCCGCCGTCATCATCGTTGCCCAAAGGGTAAGCACGATTACGGATG
CGGATCAAATCATCGTTTTAAATGAAGGAAAAATAGCCGGCATCGGCACTCATCAACAATTGCTTGCTGAAAACGGCATT
TACCAGGAAATCGTCGCATCACAGCAGGCTGAGGAGGAAAGCGCATGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(349-496)

ABC transporter transmembrane region (ABC_membrane)

(15-283)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q65IR1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

41.056

100

0.419