Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | FK728_RS16440 | Genome accession | NZ_CP041587 |
| Coordinates | 3464037..3464462 (-) | Length | 141 a.a. |
| NCBI ID | WP_000788339.1 | Uniprot ID | A0A009QPU5 |
| Organism | Acinetobacter baumannii strain J9 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3459037..3469462
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FK728_RS16410 (FK728_03254) | - | 3459569..3460600 (+) | 1032 | WP_001189455.1 | lipase secretion chaperone | - |
| FK728_RS16415 (FK728_03255) | - | 3460715..3461656 (+) | 942 | WP_085916958.1 | lipase family alpha/beta hydrolase | - |
| FK728_RS16420 (FK728_03256) | rplS | 3461709..3462077 (-) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| FK728_RS16425 (FK728_03257) | trmD | 3462285..3463025 (-) | 741 | WP_000464596.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| FK728_RS16430 (FK728_03258) | rimM | 3463071..3463619 (-) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| FK728_RS16435 (FK728_03259) | rpsP | 3463639..3463890 (-) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| FK728_RS16440 (FK728_03260) | pilE | 3464037..3464462 (-) | 426 | WP_000788339.1 | type IV pilin protein | Machinery gene |
| FK728_RS16445 (FK728_03261) | pilY2 | 3464459..3464941 (-) | 483 | WP_001046425.1 | type IV pilin protein | Machinery gene |
| FK728_RS16450 (FK728_03262) | pilY1 | 3464954..3468808 (-) | 3855 | WP_000768962.1 | PilC/PilY family type IV pilus protein | Machinery gene |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15210.39 Da Isoelectric Point: 7.8144
>NTDB_id=372400 FK728_RS16440 WP_000788339.1 3464037..3464462(-) (pilE) [Acinetobacter baumannii strain J9]
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKMVNNRYPSNATIQSIYGSNVSPLQG
KALYTLAFTTLNDSTWVLTATPIANTSQAGDGIICLNDQGQKFWAKGATDCALSASSSWTE
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKMVNNRYPSNATIQSIYGSNVSPLQG
KALYTLAFTTLNDSTWVLTATPIANTSQAGDGIICLNDQGQKFWAKGATDCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=372400 FK728_RS16440 WP_000788339.1 3464037..3464462(-) (pilE) [Acinetobacter baumannii strain J9]
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTCGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACTTTAGAGTCTC
AAAAAATGGTGAATAACCGTTATCCCTCAAATGCAACTATACAATCAATTTATGGCTCTAATGTGAGTCCTCTTCAGGGC
AAAGCTTTATATACTTTAGCTTTTACTACTTTAAACGATTCGACATGGGTGCTTACGGCAACACCAATCGCTAATACTTC
ACAAGCTGGTGATGGAATTATTTGCTTAAATGATCAAGGGCAAAAATTTTGGGCAAAAGGTGCTACAGATTGTGCACTAT
CGGCTTCATCAAGTTGGACAGAGTAA
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTCGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACTTTAGAGTCTC
AAAAAATGGTGAATAACCGTTATCCCTCAAATGCAACTATACAATCAATTTATGGCTCTAATGTGAGTCCTCTTCAGGGC
AAAGCTTTATATACTTTAGCTTTTACTACTTTAAACGATTCGACATGGGTGCTTACGGCAACACCAATCGCTAATACTTC
ACAAGCTGGTGATGGAATTATTTGCTTAAATGATCAAGGGCAAAAATTTTGGGCAAAAGGTGCTACAGATTGTGCACTAT
CGGCTTCATCAAGTTGGACAGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
97.872 |
100 |
0.979 |
| comF | Acinetobacter baylyi ADP1 |
51.429 |
99.291 |
0.511 |