Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | BMQ_RS25510 | Genome accession | NC_014019 |
| Coordinates | 5081943..5082443 (-) | Length | 166 a.a. |
| NCBI ID | WP_013059914.1 | Uniprot ID | A0A0B6A5N1 |
| Organism | Priestia megaterium QM B1551 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 5076943..5087443
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BMQ_RS25490 (BMQ_5264) | rplI | 5078098..5078547 (-) | 450 | WP_013059910.1 | 50S ribosomal protein L9 | - |
| BMQ_RS25495 (BMQ_5265) | - | 5078544..5080517 (-) | 1974 | WP_013059911.1 | DHH family phosphoesterase | - |
| BMQ_RS25500 (BMQ_5266) | - | 5080554..5081498 (-) | 945 | WP_013059912.1 | YybS family protein | - |
| BMQ_RS25505 (BMQ_5267) | rpsR | 5081637..5081876 (-) | 240 | WP_013059913.1 | 30S ribosomal protein S18 | - |
| BMQ_RS25510 (BMQ_5268) | ssbA | 5081943..5082443 (-) | 501 | WP_013059914.1 | single-stranded DNA-binding protein | Machinery gene |
| BMQ_RS25515 (BMQ_5269) | rpsF | 5082492..5082779 (-) | 288 | WP_013059915.1 | 30S ribosomal protein S6 | - |
| BMQ_RS25520 (BMQ_5270) | ychF | 5082969..5084069 (-) | 1101 | WP_013059916.1 | redox-regulated ATPase YchF | - |
| BMQ_RS25525 (BMQ_5271) | - | 5084240..5084437 (-) | 198 | WP_013059917.1 | DUF951 domain-containing protein | - |
| BMQ_RS25530 (BMQ_5272) | - | 5084452..5085345 (-) | 894 | WP_013059918.1 | mechanosensitive ion channel family protein | - |
| BMQ_RS25535 (BMQ_5273) | - | 5085413..5086426 (-) | 1014 | WP_013059919.1 | membrane protein | - |
| BMQ_RS25540 (BMQ_5274) | yyaC | 5086513..5087133 (+) | 621 | WP_013059920.1 | spore protease YyaC | - |
Sequence
Protein
Download Length: 166 a.a. Molecular weight: 18132.76 Da Isoelectric Point: 4.6529
>NTDB_id=36931 BMQ_RS25510 WP_013059914.1 5081943..5082443(-) (ssbA) [Priestia megaterium QM B1551]
MMNRVILVGRLTKDPELRYTPSGAAVATFTLAVNRTFTNQQGEREADFINCVVWRRQAENAANFLKKGSLAGVDGRLQSR
SYEGQDGRRVYVTEVVAESVQFLEPKSGGGDTQRSNFANTGGSGQGSPFGDNQNRNSGNQGYTRVDDDPFANNGETIDIS
DDDLPF
MMNRVILVGRLTKDPELRYTPSGAAVATFTLAVNRTFTNQQGEREADFINCVVWRRQAENAANFLKKGSLAGVDGRLQSR
SYEGQDGRRVYVTEVVAESVQFLEPKSGGGDTQRSNFANTGGSGQGSPFGDNQNRNSGNQGYTRVDDDPFANNGETIDIS
DDDLPF
Nucleotide
Download Length: 501 bp
>NTDB_id=36931 BMQ_RS25510 WP_013059914.1 5081943..5082443(-) (ssbA) [Priestia megaterium QM B1551]
ATGATGAATCGCGTAATTCTCGTAGGACGCTTAACCAAAGATCCTGAATTACGTTATACCCCGAGTGGAGCAGCGGTTGC
AACATTCACTTTAGCGGTAAACCGCACATTTACAAATCAGCAAGGTGAACGTGAAGCTGACTTCATCAACTGTGTTGTAT
GGCGTCGTCAGGCTGAAAATGCAGCCAATTTCCTTAAAAAAGGAAGTTTAGCTGGTGTTGATGGTCGACTACAATCTCGC
AGTTACGAAGGACAAGACGGTCGTCGTGTATACGTAACGGAAGTTGTAGCGGAAAGTGTGCAATTTTTAGAGCCGAAAAG
TGGCGGTGGGGATACGCAACGCAGTAACTTTGCTAACACTGGAGGATCTGGACAAGGCTCTCCATTTGGAGATAATCAGA
ACCGTAACTCAGGTAATCAAGGTTATACTCGCGTTGATGATGATCCATTTGCAAATAATGGCGAGACAATTGACATTTCT
GATGACGATTTACCGTTTTAA
ATGATGAATCGCGTAATTCTCGTAGGACGCTTAACCAAAGATCCTGAATTACGTTATACCCCGAGTGGAGCAGCGGTTGC
AACATTCACTTTAGCGGTAAACCGCACATTTACAAATCAGCAAGGTGAACGTGAAGCTGACTTCATCAACTGTGTTGTAT
GGCGTCGTCAGGCTGAAAATGCAGCCAATTTCCTTAAAAAAGGAAGTTTAGCTGGTGTTGATGGTCGACTACAATCTCGC
AGTTACGAAGGACAAGACGGTCGTCGTGTATACGTAACGGAAGTTGTAGCGGAAAGTGTGCAATTTTTAGAGCCGAAAAG
TGGCGGTGGGGATACGCAACGCAGTAACTTTGCTAACACTGGAGGATCTGGACAAGGCTCTCCATTTGGAGATAATCAGA
ACCGTAACTCAGGTAATCAAGGTTATACTCGCGTTGATGATGATCCATTTGCAAATAATGGCGAGACAATTGACATTTCT
GATGACGATTTACCGTTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
72.571 |
100 |
0.765 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
58.721 |
100 |
0.608 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
63.208 |
63.855 |
0.404 |
| ssb | Vibrio cholerae strain A1552 |
33.889 |
100 |
0.367 |
| ssb | Glaesserella parasuis strain SC1401 |
34.463 |
100 |
0.367 |