Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | FIM01_RS01800 | Genome accession | NZ_CP041035 |
| Coordinates | 384284..384709 (+) | Length | 141 a.a. |
| NCBI ID | WP_000788336.1 | Uniprot ID | A0A0J0ZME6 |
| Organism | Acinetobacter baumannii strain 11W359501 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 379284..389709
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FIM01_RS01790 (FIM01_01790) | pilY1 | 379940..383794 (+) | 3855 | WP_000768943.1 | vWA domain-containing protein | Machinery gene |
| FIM01_RS01795 (FIM01_01795) | pilY2 | 383805..384287 (+) | 483 | WP_001046489.1 | type IV pilin protein | Machinery gene |
| FIM01_RS01800 (FIM01_01800) | pilE | 384284..384709 (+) | 426 | WP_000788336.1 | type IV pilin protein | Machinery gene |
| FIM01_RS01805 (FIM01_01805) | rpsP | 384856..385107 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| FIM01_RS01810 (FIM01_01810) | rimM | 385127..385675 (+) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| FIM01_RS01815 (FIM01_01815) | trmD | 385721..386461 (+) | 741 | WP_000464595.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| FIM01_RS01820 (FIM01_01820) | rplS | 386669..387037 (+) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| FIM01_RS01825 (FIM01_01825) | - | 387089..388030 (-) | 942 | WP_085916958.1 | lipase family alpha/beta hydrolase | - |
| FIM01_RS01830 (FIM01_01830) | - | 388145..389176 (-) | 1032 | WP_001189459.1 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15175.41 Da Isoelectric Point: 7.8144
>NTDB_id=369040 FIM01_RS01800 WP_000788336.1 384284..384709(+) (pilE) [Acinetobacter baumannii strain 11W359501]
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKIVNNRYPSDATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTAIPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKIVNNRYPSDATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTAIPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=369040 FIM01_RS01800 WP_000788336.1 384284..384709(+) (pilE) [Acinetobacter baumannii strain 11W359501]
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTCGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACTTTAGAGTCTC
AAAAAATAGTAAATAACCGTTATCCTTCGGATGCAACTATACAATCAATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTAAATGATTCAACTTGGGTACTTACTGCAATACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAGGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCGAGTTGGACCGAGTAA
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTCGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACTTTAGAGTCTC
AAAAAATAGTAAATAACCGTTATCCTTCGGATGCAACTATACAATCAATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTAAATGATTCAACTTGGGTACTTACTGCAATACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAGGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCGAGTTGGACCGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
90.071 |
100 |
0.901 |
| comF | Acinetobacter baylyi ADP1 |
49.286 |
99.291 |
0.489 |