Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | FIM01_RS01775 | Genome accession | NZ_CP041035 |
| Coordinates | 377551..378111 (+) | Length | 186 a.a. |
| NCBI ID | WP_002194578.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain 11W359501 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 372551..383111
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FIM01_RS01750 (FIM01_01750) | - | 374692..374822 (-) | 131 | Protein_328 | hypothetical protein | - |
| FIM01_RS01755 (FIM01_01755) | rpoZ | 374861..375139 (-) | 279 | WP_000135049.1 | DNA-directed RNA polymerase subunit omega | - |
| FIM01_RS01760 (FIM01_01760) | gmk | 375212..375841 (-) | 630 | WP_000015937.1 | guanylate kinase | - |
| FIM01_RS01765 (FIM01_01765) | ispH | 375964..376914 (+) | 951 | WP_000407064.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| FIM01_RS01770 (FIM01_01770) | fimU | 377084..377557 (+) | 474 | WP_001214060.1 | Tfp pilus assembly protein FimT/FimU | Machinery gene |
| FIM01_RS01775 (FIM01_01775) | pilV | 377551..378111 (+) | 561 | WP_002194578.1 | type IV pilus modification protein PilV | Machinery gene |
| FIM01_RS01780 (FIM01_01780) | pilW | 378112..379113 (+) | 1002 | WP_000079197.1 | PilW family protein | Machinery gene |
| FIM01_RS01785 (FIM01_01785) | pilX | 379110..379928 (+) | 819 | WP_000149374.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
Sequence
Protein
Download Length: 186 a.a. Molecular weight: 20162.12 Da Isoelectric Point: 8.2247
>NTDB_id=369035 FIM01_RS01775 WP_002194578.1 377551..378111(+) (pilV) [Acinetobacter baumannii strain 11W359501]
MLMHHYKQKAQAGVGLLEVLVALILLAIGVLGYVALQLRAMDASSEALSKSQAILVMRGLAENIRTNSTQASQYPTFVRS
YSNYTSDTPAPTSCFNSLCTASQLAQFDAYQAARNANQLGMRITMSNCPGVTNTMVQQRQCLFVFWGKTAPVITTNGTNT
SVDVSSCMSNNGVYVNNSTCLMMEAY
MLMHHYKQKAQAGVGLLEVLVALILLAIGVLGYVALQLRAMDASSEALSKSQAILVMRGLAENIRTNSTQASQYPTFVRS
YSNYTSDTPAPTSCFNSLCTASQLAQFDAYQAARNANQLGMRITMSNCPGVTNTMVQQRQCLFVFWGKTAPVITTNGTNT
SVDVSSCMSNNGVYVNNSTCLMMEAY
Nucleotide
Download Length: 561 bp
>NTDB_id=369035 FIM01_RS01775 WP_002194578.1 377551..378111(+) (pilV) [Acinetobacter baumannii strain 11W359501]
TTGTTAATGCATCACTATAAGCAAAAAGCCCAAGCTGGGGTGGGTTTACTCGAAGTTTTGGTTGCCTTAATTTTACTTGC
TATTGGAGTTTTAGGTTATGTTGCCTTGCAGCTAAGAGCTATGGATGCCTCTTCAGAAGCATTAAGTAAATCTCAAGCCA
TTCTAGTGATGAGGGGATTAGCAGAAAATATCCGTACAAATAGTACTCAAGCTAGCCAGTATCCTACATTTGTGCGTAGT
TATAGCAACTATACATCTGATACTCCTGCACCCACGTCATGTTTTAACTCTCTATGTACTGCCTCCCAACTTGCTCAATT
TGATGCCTATCAAGCAGCTAGAAATGCTAATCAACTGGGTATGAGAATTACGATGTCAAATTGCCCTGGCGTTACAAATA
CAATGGTGCAACAACGCCAGTGCCTATTTGTCTTTTGGGGTAAAACTGCGCCAGTGATTACTACAAATGGAACAAATACT
AGTGTGGATGTTTCAAGTTGTATGAGTAATAACGGTGTTTACGTGAATAATTCAACTTGCTTAATGATGGAGGCATATTA
A
TTGTTAATGCATCACTATAAGCAAAAAGCCCAAGCTGGGGTGGGTTTACTCGAAGTTTTGGTTGCCTTAATTTTACTTGC
TATTGGAGTTTTAGGTTATGTTGCCTTGCAGCTAAGAGCTATGGATGCCTCTTCAGAAGCATTAAGTAAATCTCAAGCCA
TTCTAGTGATGAGGGGATTAGCAGAAAATATCCGTACAAATAGTACTCAAGCTAGCCAGTATCCTACATTTGTGCGTAGT
TATAGCAACTATACATCTGATACTCCTGCACCCACGTCATGTTTTAACTCTCTATGTACTGCCTCCCAACTTGCTCAATT
TGATGCCTATCAAGCAGCTAGAAATGCTAATCAACTGGGTATGAGAATTACGATGTCAAATTGCCCTGGCGTTACAAATA
CAATGGTGCAACAACGCCAGTGCCTATTTGTCTTTTGGGGTAAAACTGCGCCAGTGATTACTACAAATGGAACAAATACT
AGTGTGGATGTTTCAAGTTGTATGAGTAATAACGGTGTTTACGTGAATAATTCAACTTGCTTAATGATGGAGGCATATTA
A
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |
| pilV | Acinetobacter baylyi ADP1 |
41.398 |
100 |
0.414 |