Detailed information    

insolico Bioinformatically predicted

Overview

Name   recJ   Type   Machinery gene
Locus tag   FHJ82_RS19820 Genome accession   NZ_CP040881
Coordinates   2612527..2612676 (-) Length   49 a.a.
NCBI ID   WP_348770495.1    Uniprot ID   -
Organism   Bacillus sp. HNA3     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 2607527..2617676
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FHJ82_RS12625 (FHJ82_12750) - 2607612..2609170 (+) 1559 Protein_2454 N-acetylmuramoyl-L-alanine amidase -
  FHJ82_RS12630 (FHJ82_12755) dtd 2609196..2609638 (-) 443 Protein_2455 D-aminoacyl-tRNA deacylase -
  FHJ82_RS12635 (FHJ82_12760) relA 2609651..2611854 (-) 2204 Protein_2456 GTP diphosphokinase -
  FHJ82_RS12640 (FHJ82_12765) - 2612010..2612498 (-) 489 WP_168731128.1 adenine phosphoribosyltransferase -
  FHJ82_RS19820 recJ 2612527..2612676 (-) 150 WP_348770495.1 single-stranded-DNA-specific exonuclease C-terminal domain-containing protein Machinery gene
  FHJ82_RS12645 (FHJ82_12770) recJ 2612742..2614886 (-) 2145 Protein_2459 single-stranded-DNA-specific exonuclease RecJ -
  FHJ82_RS12650 (FHJ82_12775) - 2614942..2615268 (-) 327 WP_014418528.1 lipopolysaccharide assembly LapA domain-containing protein -
  FHJ82_RS12655 (FHJ82_12780) - 2615331..2615828 (-) 498 WP_032873843.1 cation:proton antiporter regulatory subunit -

Sequence

Protein


Download         Length: 49 a.a.        Molecular weight: 5807.48 Da        Isoelectric Point: 5.7134

>NTDB_id=367975 FHJ82_RS19820 WP_348770495.1 2612527..2612676(-) (recJ) [Bacillus sp. HNA3]
MADSQTYQVKQQLMELDQKLNYSAAHELKEWLNKLMNQGSEAYESTRRT

Nucleotide


Download         Length: 150 bp        

>NTDB_id=367975 FHJ82_RS19820 WP_348770495.1 2612527..2612676(-) (recJ) [Bacillus sp. HNA3]
CTGGCAGATTCGCAAACCTATCAGGTAAAACAGCAGCTGATGGAATTAGACCAGAAGCTCAATTATTCCGCAGCCCATGA
GCTGAAGGAATGGCTGAATAAGCTGATGAACCAAGGTTCAGAAGCTTATGAAAGTACGAGGAGGACATAG

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recJ Bacillus subtilis subsp. subtilis str. 168

85.714

100

0.857

Multiple sequence alignment