Detailed information NTG0367952

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: FHJ82_RS12570
• Genome accession: NZ_CP040881
• Coordinates: 2595388..2597766 (-)
• Length: 792 a.a.
• NCBI ID: WP_032873862.1
• Uniprot ID: -
• Organism: Bacillus sp. HNA3
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2590388..2602766

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FHJ82_RS12535 (FHJ82_12665)	-	2591463..2592191 (+)	729	WP_032873875.1	amino acid ABC transporter ATP-binding protein	-
FHJ82_RS12540 (FHJ82_12670)	-	2592212..2593039 (+)	828	WP_007408208.1	transporter substrate-binding domain-containing protein	-
FHJ82_RS12545 (FHJ82_12675)	-	2593096..2593746 (+)	651	WP_032873872.1	amino acid ABC transporter permease	-
FHJ82_RS12550 (FHJ82_12680)	-	2593765..2594421 (+)	657	WP_032873869.1	amino acid ABC transporter permease	-
FHJ82_RS12555 (FHJ82_12685)	-	2594457..2594588 (-)	132	WP_003152741.1	YrzQ family protein	-
FHJ82_RS12560 (FHJ82_12690)	-	2594610..2594801 (-)	192	WP_003152738.1	hypothetical protein	-
FHJ82_RS12565 (FHJ82_12695)	-	2594814..2595269 (-)	456	WP_032873866.1	PRC-barrel domain-containing protein	-
FHJ82_RS12570 (FHJ82_12700)	recD2	2595388..2597766 (-)	2379	WP_032873862.1	ATP-dependent RecD-like DNA helicase	Machinery gene
FHJ82_RS12575 (FHJ82_12705)	-	2597785..2598435 (-)	651	WP_032873859.1	tetratricopeptide repeat protein	-
FHJ82_RS12580 (FHJ82_12710)	mnmA	2598493..2599608 (-)	1116	WP_012118077.1	tRNA 2-thiouridine(34) synthase MnmA	-
FHJ82_RS12585 (FHJ82_12715)	-	2599645..2600784 (-)	1140	WP_032873857.1	cysteine desulfurase family protein	-
FHJ82_RS12590 (FHJ82_12720)	cymR	2600803..2601219 (-)	417	WP_003152730.1	cysteine metabolism transcriptional regulator CymR	-
FHJ82_RS12595 (FHJ82_12725)	-	2601414..2602682 (+)	1269	WP_029326053.1	replication-associated recombination protein A	-

Sequence

Protein

• Length: 792 a.a.
• Molecular weight: 88366.06 Da
• Isoelectric Point: 4.9870

>NTDB_id=367952 FHJ82_RS12570 WP_032873862.1 2595388..2597766(-) (recD2) [Bacillus sp. HNA3]
MDQLNIEEQPYVKGIIHTVIYHNDTNLYTVLKVKVAETSEAIEDKVVSVTGYFPLLQEDETYTFYGKTATHPKFGLQFQA
EHFKKEIPTTKEGIIHYLSSDLFEGIGKKTAEEIVKKLGDGALNKILTDASVLYDVPKMSKKKADKLAGELQRHQGLEQI
MISLNQYGFGPQLSMKIYQAYETETLEKIQENPYQLVKDVEGIGFVKADELGGKMGLSGNHPERIKAAILYTIESTCLSE
GHTYIETKQLIINTQTLLNQSAEGGRVTEMDAADGIIALGESKDIVIEGERCYFPSLFYAEQNVAKRVLDIAAQTEYADQ
FPESEFLLALGELEERMNVQYAPSQKDAIQKALSSPMLLLTGGPGTGKTTVIKGIVELYSELHGVSLDPGDYKKDEAFPL
LLAAPTGRAAKRMSESTGLPAVTIHRLLGWNGAEGFTYNEDQPIEGKLIIIDEASMLDIWLASHLFKALPKHIQLIVVGD
EDQLPSVGPGQVLRDLLASEVLPTVRLTDIYRQAEGSSIVELAHDMKKGLLPKGLTAPTKDRSFIRCNSSQIKEVVDQVV
SNALKKGYTSRDIQVLAPMYRGKAGINELNMLLQDIMNPPKEKRRELKFGDVVYRTGDKILQLVNQPENNVFNGDIGEIV
SIFYAKENTEKEDMVVVSFDGNEITFTKKDFSQFTHAYCCSIHKSQGSEFPIVVLPVVKGYYRMLRRNLLYTAITRAKKF
LILCGEEEALEWGVKNNDATVRQTSLKNRLTEQTEEMDAELAALQKELPFSVHDANIGMEGITPFDFMEEKA

Nucleotide

• Length: 2379 bp

>NTDB_id=367952 FHJ82_RS12570 WP_032873862.1 2595388..2597766(-) (recD2) [Bacillus sp. HNA3]
GTGGATCAGCTGAACATCGAAGAACAGCCGTATGTAAAAGGCATCATTCATACGGTCATTTATCATAATGACACCAACCT
GTATACAGTGCTGAAAGTCAAAGTTGCAGAAACGTCTGAGGCGATCGAAGACAAGGTCGTATCCGTAACGGGCTACTTCC
CTCTGCTGCAAGAAGATGAGACCTACACATTTTATGGAAAAACCGCCACGCATCCTAAGTTCGGCCTGCAATTTCAGGCT
GAACACTTTAAAAAAGAAATTCCGACCACAAAAGAAGGGATCATTCACTACTTATCAAGTGATCTGTTTGAAGGAATCGG
AAAAAAAACGGCGGAAGAAATCGTCAAAAAGCTCGGAGACGGCGCGCTCAATAAAATTCTGACGGATGCGTCGGTGCTTT
ACGATGTGCCGAAAATGTCGAAAAAGAAAGCGGATAAGCTTGCCGGAGAGCTGCAGCGGCATCAGGGGCTGGAGCAGATT
ATGATCTCTCTGAACCAATACGGTTTCGGGCCCCAGCTATCAATGAAAATATATCAGGCCTACGAAACGGAAACCCTGGA
GAAAATTCAGGAAAATCCTTATCAGCTTGTAAAAGACGTTGAAGGCATCGGCTTTGTGAAAGCTGACGAGCTGGGCGGAA
AAATGGGTCTGTCAGGAAACCACCCGGAGCGGATCAAAGCGGCAATCTTATATACGATTGAATCGACCTGTCTTTCAGAA
GGCCATACGTACATAGAGACAAAGCAGCTGATTATCAATACGCAAACGCTCCTGAATCAGTCAGCTGAAGGCGGCCGCGT
CACAGAAATGGATGCGGCTGACGGCATCATCGCCCTCGGGGAGAGTAAGGATATCGTCATTGAAGGAGAGCGCTGCTATT
TTCCGTCCTTGTTTTACGCCGAACAAAATGTCGCAAAACGCGTGCTCGACATTGCGGCTCAGACGGAGTATGCCGATCAA
TTTCCTGAATCGGAATTTCTGCTTGCACTCGGTGAACTGGAAGAACGGATGAATGTTCAATACGCACCAAGCCAAAAGGA
TGCCATTCAAAAAGCGCTGTCTTCACCGATGCTTTTATTGACCGGAGGACCCGGGACGGGGAAAACGACCGTTATTAAAG
GAATCGTGGAATTATACAGTGAACTGCACGGAGTATCGCTTGACCCCGGTGATTATAAAAAAGACGAGGCGTTTCCGCTG
CTGCTTGCCGCGCCGACGGGAAGAGCCGCAAAACGGATGAGCGAATCTACGGGTCTGCCGGCTGTTACGATTCACAGGCT
GCTCGGCTGGAATGGCGCTGAAGGCTTTACCTACAATGAAGATCAGCCGATTGAAGGGAAACTGATTATTATAGACGAAG
CGAGTATGCTCGATATCTGGCTCGCCAGCCATTTGTTTAAGGCGCTTCCTAAGCACATTCAGCTCATTGTCGTCGGTGAT
GAAGACCAGCTTCCTTCAGTCGGACCGGGGCAGGTGCTCAGAGACCTTTTGGCTTCTGAGGTGCTGCCGACCGTGCGCCT
GACAGATATTTACCGTCAGGCTGAAGGATCATCCATTGTGGAACTTGCGCATGATATGAAAAAAGGACTGCTTCCAAAGG
GGCTGACCGCGCCGACAAAGGACCGCTCATTTATCCGCTGTAATTCTTCACAGATTAAAGAAGTCGTGGATCAGGTCGTT
TCGAACGCGTTAAAAAAGGGGTATACCTCCAGGGATATTCAAGTGCTTGCCCCGATGTACAGGGGAAAAGCGGGAATTAA
CGAGCTGAATATGCTTCTTCAAGACATCATGAATCCGCCGAAAGAAAAAAGGCGGGAGCTGAAATTCGGTGATGTCGTCT
ACAGGACGGGCGATAAAATATTACAGCTTGTCAACCAGCCGGAAAACAATGTGTTTAACGGCGATATCGGCGAAATCGTG
TCCATTTTTTATGCCAAAGAAAATACGGAAAAAGAAGACATGGTCGTCGTCTCGTTTGACGGCAACGAAATCACCTTTAC
GAAAAAGGATTTCAGCCAGTTTACCCACGCTTACTGCTGTTCCATTCATAAGTCGCAGGGAAGCGAATTCCCTATTGTCG
TCCTGCCTGTCGTCAAAGGCTACTATCGAATGCTCAGGAGAAATCTGCTTTATACCGCCATAACAAGAGCGAAAAAATTT
CTGATTCTTTGCGGAGAAGAAGAAGCGCTTGAATGGGGCGTCAAAAACAATGATGCCACCGTCAGACAGACGTCGCTTAA
AAACAGGCTCACAGAGCAGACTGAAGAGATGGATGCAGAACTGGCCGCCCTGCAAAAAGAGCTGCCGTTCAGTGTACATG
ATGCGAACATCGGAATGGAAGGCATCACGCCGTTTGACTTTATGGAAGAAAAAGCGTAA

Domains

Predicted by InterproScan.

• AAA domain (AAA_30) (341-548)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (589-659)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (676-724)

• Helix-hairpin-helix containing domain (HHH_RecD2) (154-244)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	89.001	99.874	0.889