Detailed information NTG0367386

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: FHI56_RS11245
• Genome accession: NZ_CP040804
• Coordinates: 2179700..2180629 (-)
• Length: 309 a.a.
• NCBI ID: WP_045771698.1
• Uniprot ID: A0AAP3Q7D9
• Organism: Streptococcus salivarius strain LAB813
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 2174700..2185629

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FHI56_RS11215 (FHI56_11215)	-	2175178..2175990 (-)	813	WP_045769215.1	metal ABC transporter permease	-
FHI56_RS11220 (FHI56_11220)	-	2175983..2176690 (-)	708	WP_002883613.1	metal ABC transporter ATP-binding protein	-
FHI56_RS11225 (FHI56_11225)	-	2176692..2177135 (-)	444	WP_045771699.1	zinc-dependent MarR family transcriptional regulator	-
FHI56_RS11230 (FHI56_11230)	dusB	2177298..2178275 (-)	978	WP_002883588.1	tRNA dihydrouridine synthase DusB	-
FHI56_RS11235 (FHI56_11235)	hslO	2178268..2179134 (-)	867	WP_002883609.1	Hsp33 family molecular chaperone HslO	-
FHI56_RS11240 (FHI56_11240)	-	2179214..2179573 (-)	360	WP_070475480.1	hypothetical protein	-
FHI56_RS11245 (FHI56_11245)	amiF	2179700..2180629 (-)	930	WP_045771698.1	ABC transporter ATP-binding protein	Regulator
FHI56_RS11250 (FHI56_11250)	oppD	2180631..2181671 (-)	1041	WP_014633662.1	ABC transporter ATP-binding protein	Regulator
FHI56_RS11255 (FHI56_11255)	-	2181685..2182716 (-)	1032	WP_014633663.1	ABC transporter permease	-
FHI56_RS11260 (FHI56_11260)	-	2182727..2183641 (-)	915	WP_045001977.1	ABC transporter permease	-
FHI56_RS11265 (FHI56_11265)	-	2183772..2185418 (-)	1647	WP_014633665.1	peptide ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 309 a.a.
• Molecular weight: 34941.72 Da
• Isoelectric Point: 6.5085

>NTDB_id=367386 FHI56_RS11245 WP_045771698.1 2179700..2180629(-) (amiF) [Streptococcus salivarius strain LAB813]
MTQERKKLVELKNVSLTFNKGKSNEVKAIDDVSFDIYEGEIFGLVGESGSGKTTIGRSILKLYDIDSGTVTFAGNDISSL
KGKDLHDFRKTAQMIFQDPQASLNGRMKIRDIIAEGIDIHKLAKSKEEREAKVKELINLVGLNEDHLSRYPHEFSGGQRQ
RIGIARALAVNPHFIVADEPISALDVSIQAQVVNLMQKLQHEQGLTYLFIAHDLSMVKYISDRIGVMHWGKLLEVGPADE
IYHNPIHPYTKSLLSAIPEPDPERERKRQHLIYDSSIENDGEKRQMYEIRPGHFVYATEAEAKNYKEEA

Nucleotide

• Length: 930 bp

>NTDB_id=367386 FHI56_RS11245 WP_045771698.1 2179700..2180629(-) (amiF) [Streptococcus salivarius strain LAB813]
ATGACACAAGAACGTAAGAAGTTAGTAGAATTAAAAAATGTGTCTCTAACTTTTAATAAAGGAAAATCAAACGAAGTTAA
GGCCATTGATGACGTTAGCTTTGATATCTATGAGGGCGAAATTTTCGGCCTAGTTGGAGAATCTGGTTCAGGTAAAACGA
CCATTGGGCGTTCTATTCTAAAGCTTTATGATATTGATTCGGGTACTGTTACCTTTGCTGGTAATGATATATCAAGTTTA
AAAGGGAAAGACCTTCATGATTTCCGTAAGACAGCTCAGATGATTTTTCAAGATCCTCAAGCTAGTCTTAATGGACGAAT
GAAGATTCGTGATATTATTGCTGAGGGGATTGATATTCATAAATTGGCTAAATCCAAGGAAGAACGTGAAGCCAAGGTTA
AAGAACTTATTAATTTGGTGGGATTAAATGAAGATCACTTATCAAGATATCCTCATGAATTTTCTGGTGGTCAGCGTCAA
AGAATTGGTATTGCGCGTGCTTTAGCGGTCAATCCTCATTTTATTGTAGCAGACGAACCTATCTCTGCTTTAGATGTTTC
TATTCAAGCACAAGTAGTTAATTTGATGCAAAAGTTACAACACGAACAGGGGTTAACTTATTTGTTTATTGCACATGACT
TGTCAATGGTTAAATATATATCCGATCGTATTGGTGTAATGCATTGGGGTAAACTTCTTGAGGTAGGACCAGCAGATGAG
ATTTACCATAATCCGATCCATCCTTATACAAAGAGTTTATTGTCTGCCATTCCAGAACCAGACCCAGAAAGAGAGCGTAA
ACGTCAACATTTGATTTATGATTCCTCTATTGAAAATGATGGGGAAAAGAGACAAATGTATGAAATCCGACCAGGACATT
TTGTTTATGCTACAGAAGCAGAGGCTAAAAATTATAAAGAAGAAGCCTAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-265)

• ABC transporter (ABC_tran) (30-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	54.754	98.706	0.54
amiF	Streptococcus thermophilus LMG 18311	54.426	98.706	0.537
amiF	Streptococcus salivarius strain HSISS4	54.098	98.706	0.534