Detailed information NTG0366831

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: FGY92_RS05610
• Genome accession: NZ_CP040732
• Coordinates: 1127960..1130383 (+)
• Length: 807 a.a.
• NCBI ID: WP_235063060.1
• Uniprot ID: -
• Organism: Staphylococcus hominis strain S34-1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1122960..1135383

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FGY92_RS05580 (FGY92_05650)	cymR	1122967..1123389 (+)	423	WP_002448977.1	cysteine metabolism transcriptional regulator CymR	-
FGY92_RS05585 (FGY92_05655)	-	1123499..1123642 (+)	144	WP_017176172.1	SAS049 family protein	-
FGY92_RS05590 (FGY92_05660)	-	1123741..1124745 (-)	1005	WP_049336022.1	LLM class flavin-dependent oxidoreductase	-
FGY92_RS05595 (FGY92_05665)	-	1124945..1126084 (+)	1140	WP_064207357.1	cysteine desulfurase family protein	-
FGY92_RS05600 (FGY92_05670)	mnmA	1126088..1127200 (+)	1113	WP_064207356.1	tRNA 2-thiouridine(34) synthase MnmA	-
FGY92_RS05605 (FGY92_05675)	-	1127287..1127958 (+)	672	WP_064207355.1	tetratricopeptide repeat protein	-
FGY92_RS05610 (FGY92_05680)	recD2	1127960..1130383 (+)	2424	WP_235063060.1	ATP-dependent RecD-like DNA helicase	Machinery gene
FGY92_RS05615 (FGY92_05685)	alaS	1130663..1133293 (+)	2631	WP_019835422.1	alanine--tRNA ligase	-
FGY92_RS05620 (FGY92_05690)	-	1133358..1133618 (+)	261	WP_002448947.1	IreB family regulatory phosphoprotein	-
FGY92_RS05625 (FGY92_05695)	ruvX	1133619..1134047 (+)	429	WP_017176179.1	Holliday junction resolvase RuvX	-
FGY92_RS05630 (FGY92_05700)	-	1134062..1134376 (+)	315	WP_017176180.1	DUF1292 domain-containing protein	-
FGY92_RS05635 (FGY92_05705)	-	1134637..1135272 (+)	636	WP_235063061.1	O-methyltransferase	-

Sequence

Protein

• Length: 807 a.a.
• Molecular weight: 91696.09 Da
• Isoelectric Point: 4.7749

>NTDB_id=366831 FGY92_RS05610 WP_235063060.1 1127960..1130383(+) (recD2) [Staphylococcus hominis strain S34-1]
MSNPTLFDYSMVKGTVDTILFQNKDNFYTVLKVDSIETNESFDNLPTVVGFFPNIVEGDVYTFKGQIVQHPRYGKQLKAE
TFEKELPQTKDAIISYLSSDLFKGIGKKTAQNIVNTLGENAINDILTDPSVLENVPSLAKTKQKQIVEQISANQESEKIM
IRLHDLGFGPKLSMAIYQFYQSETLKVLENNPYQLVYDVKGIGFQKADTLARNNGIAYNDSERLKAGLLYTLEEECIKQG
HTYLDENAVLEITEDMLSDKHLDETIEQQQLKHVLQTLFEEKKIILENSHVAIPSLYYSELKSVQNLYRINTYKNHFKII
EQSDLQIHIGEIEDQNNVNYAKSQQEALETAMNSKIMLLTGGPGTGKTTVIKGIVELYAEIHGLSLKYSDYQEDDYPIVL
AAPTGRASKRLQESTGLEAMTIHRLIGWNQDTQPEDILENEIKAKLIIIDEMSMVDSWLFHQFLSAVPLDAQIILVGDED
QLPSVGPGQVFKDLIESKAFPRVNLTEVYRQQDGSSIIDLAHRMKHHESIDITKRYHDRSFIHCNVEQIPTVVEKVVSSA
VNKGYDMSDIQVLAPMYKGSAGIKRLNQVLQNILNPKEKDTREIEFGDIKFRKGDKVLQLVNRPNDNIFNGDIGVIVGIF
WAKENALNKDVLIVDFEGNEITFTRQDLLELTHAYCTSIHKSQGSEFPIVIMPIVKQYFRMLQRPILYTGLTRAKQSLVL
LGDPKAFDIALNTQGQERHTQLKTLIINYFGMSHVNIDVEENDEPINIDDTEDNNADEHITLSEETIYQINPMINMGNVS
PYDFVEH

Nucleotide

• Length: 2424 bp

>NTDB_id=366831 FGY92_RS05610 WP_235063060.1 1127960..1130383(+) (recD2) [Staphylococcus hominis strain S34-1]
ATGTCAAACCCTACACTATTTGATTACTCAATGGTTAAAGGAACAGTTGATACCATTCTGTTTCAAAATAAAGATAACTT
TTATACTGTTTTAAAAGTAGATTCCATTGAAACTAATGAATCATTTGATAATCTGCCTACAGTTGTAGGGTTTTTTCCTA
ATATTGTTGAAGGAGATGTCTATACGTTTAAAGGACAAATTGTTCAACATCCTCGTTATGGTAAACAACTTAAAGCTGAA
ACATTTGAAAAAGAATTGCCTCAAACTAAAGATGCCATTATAAGTTATTTATCTAGTGACTTATTTAAAGGTATTGGTAA
AAAGACTGCTCAGAATATTGTAAATACATTAGGAGAAAATGCAATAAATGATATTTTAACTGATCCTTCTGTTCTTGAAA
ATGTTCCTAGTTTAGCAAAAACGAAACAAAAACAGATTGTAGAACAGATTAGTGCAAATCAAGAATCAGAAAAAATAATG
ATTCGCTTACATGACTTAGGTTTTGGTCCAAAATTATCTATGGCGATTTATCAATTCTATCAATCAGAGACTTTAAAAGT
TTTAGAAAACAATCCATACCAATTAGTTTATGATGTAAAAGGTATTGGTTTTCAAAAAGCTGATACATTAGCTAGAAATA
ATGGTATTGCTTATAACGATTCAGAACGTTTAAAAGCTGGATTATTATATACTCTTGAAGAAGAATGTATAAAACAGGGG
CATACTTATTTAGATGAAAATGCTGTATTAGAAATTACAGAAGATATGCTTTCAGATAAGCATTTAGATGAAACAATTGA
ACAACAACAATTAAAACATGTACTACAAACACTTTTTGAAGAAAAGAAAATTATTTTAGAGAATAGTCATGTTGCGATTC
CAAGTTTATACTATTCAGAACTTAAAAGTGTTCAAAATTTGTATCGTATCAACACATACAAAAATCACTTTAAAATAATA
GAGCAATCAGATTTACAGATACATATTGGTGAAATAGAAGATCAAAATAATGTTAATTATGCTAAATCACAACAAGAAGC
ACTTGAAACGGCGATGAATTCGAAAATAATGTTACTAACTGGAGGTCCAGGAACAGGTAAAACAACTGTTATTAAAGGGA
TTGTAGAATTGTATGCTGAAATTCATGGTCTATCTCTTAAGTATTCCGATTATCAAGAAGATGATTATCCAATCGTATTA
GCCGCCCCAACTGGAAGGGCATCAAAACGTTTACAAGAATCAACTGGATTAGAAGCAATGACGATTCATCGATTAATAGG
ATGGAATCAAGATACTCAACCAGAAGATATTCTTGAAAATGAAATTAAAGCTAAGCTCATTATAATTGATGAAATGTCAA
TGGTTGATTCTTGGTTGTTCCATCAATTTTTAAGTGCCGTTCCACTAGATGCACAAATTATTCTAGTAGGCGATGAAGAT
CAATTGCCGTCTGTCGGTCCTGGCCAAGTATTTAAGGATTTAATTGAGTCTAAAGCATTTCCAAGAGTTAATTTAACTGA
AGTTTATCGCCAACAAGATGGTTCTAGTATTATTGACTTAGCTCATCGCATGAAACATCATGAGTCAATAGATATTACAA
AACGTTATCACGATAGAAGTTTTATTCATTGCAATGTAGAACAAATTCCAACCGTAGTGGAGAAAGTAGTATCTAGCGCT
GTAAATAAAGGATATGATATGAGTGATATTCAAGTTTTAGCACCTATGTACAAAGGAAGTGCAGGGATAAAAAGACTTAA
TCAAGTATTACAAAATATTTTAAATCCTAAAGAAAAAGATACAAGAGAAATAGAGTTTGGCGATATAAAGTTTAGAAAAG
GAGACAAAGTTTTACAACTAGTTAATCGACCAAATGACAATATTTTTAATGGTGATATTGGCGTCATAGTAGGTATATTT
TGGGCTAAAGAAAATGCACTTAATAAAGATGTACTGATTGTCGATTTTGAAGGAAATGAAATTACATTTACTAGACAAGA
TTTATTAGAACTCACACATGCTTATTGTACCTCAATCCATAAATCACAAGGATCAGAATTCCCAATTGTTATTATGCCTA
TTGTCAAACAATATTTTAGAATGTTGCAAAGACCTATTTTATATACAGGTCTGACACGTGCAAAACAATCTTTAGTACTA
TTAGGAGATCCAAAAGCATTTGACATTGCCTTAAATACTCAAGGTCAAGAAAGACATACACAATTAAAAACACTAATTAT
AAATTATTTTGGTATGAGTCATGTTAATATAGACGTAGAAGAGAATGATGAACCGATAAATATAGATGATACAGAGGATA
ATAATGCAGATGAACACATTACTTTAAGTGAAGAAACAATTTATCAAATTAATCCAATGATTAATATGGGAAATGTTTCA
CCTTACGACTTTGTTGAACATTGA

Domains

Predicted by InterproScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (586-656)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (673-721)

• AAA domain (AAA_30) (340-545)

• Helix-hairpin-helix containing domain (HHH_RecD2) (153-243)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	49.254	99.628	0.491