Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   M594_RS03685 Genome accession   NZ_CP047883
Coordinates   750994..752742 (+) Length   582 a.a.
NCBI ID   WP_173876006.1    Uniprot ID   -
Organism   Streptococcus mitis strain S022-V3-A4     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 745994..757742
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M594_RS03670 (M594_03700) thrB 747185..748054 (+) 870 WP_049516101.1 homoserine kinase -
  M594_RS03675 (M594_03705) msrB 748269..749207 (+) 939 WP_173876004.1 peptide-methionine (R)-S-oxide reductase MsrB -
  M594_RS03680 (M594_03710) - 749268..750992 (+) 1725 WP_173876005.1 ABC transporter ATP-binding protein -
  M594_RS03685 (M594_03715) rcrQ 750994..752742 (+) 1749 WP_173876006.1 ABC transporter ATP-binding protein Regulator
  M594_RS03690 (M594_03720) - 753046..754305 (+) 1260 WP_173876007.1 TRZ/ATZ family protein -
  M594_RS03695 (M594_03725) rplJ 754556..755056 (+) 501 WP_001287277.1 50S ribosomal protein L10 -
  M594_RS03700 (M594_03730) rplL 755129..755497 (+) 369 WP_001196965.1 50S ribosomal protein L7/L12 -
  M594_RS03705 (M594_03735) - 755700..755873 (+) 174 WP_173876008.1 hypothetical protein -
  M594_RS03710 (M594_03740) - 755870..756420 (+) 551 Protein_687 replication initiator protein A -
  M594_RS03715 (M594_03745) - 756980..757663 (+) 684 WP_173876009.1 response regulator transcription factor -

Sequence

Protein


Download         Length: 582 a.a.        Molecular weight: 64725.31 Da        Isoelectric Point: 8.5423

>NTDB_id=366293 M594_RS03685 WP_173876006.1 750994..752742(+) (rcrQ) [Streptococcus mitis strain S022-V3-A4]
MRRQTANQTLKRLAKDLASHPFLLFLAFLGTIAQVGLSIYLPILIGQVIDQVLVAGSSPVFWQIFLQMLLVVIGNTLVQW
ANPLLYNRLIFSYTRDLRERIIHKLHRLPIAFVDRQGGGEMVSRVTTDIEQLAAGLTMIFNQFFIGVLMILVSILAMLQI
HLLMTLLVLLLTPLSMVISRFIAKRSYHLFQKQTETRGIQTQLIEESLSQQTIIQSFNAQEEFMKRLHEANANYAGYSQS
AIFYSSTVNPSTRFVNALIYALLAGVGAYRIMMGSTLTIGRLVTFLNYVQQYTKPFNDISSVLAELQSALACAERIYAIL
ESPEVAETGKEVLTSDQVKGAISFKHVSFGYHPEKILIKDLSIDIPAGSKVAIVGPTGAGKSTLINLLMRFYPINSGDIL
LDGQSIYDYTRASLRQQFGMVLQETWLKQGTIHDNIAFGNPDASREQVIAAAKAANADFFIQQLPQGYDTKLENAGESLS
VGQAQLLTIARVFLAIPKILILDEATSSIDTRTEVLVQDAFAKLMKGRTSFIIAHRLSTIQDADLILVLVDGDIVEYGNH
HALMAKKGKYYQMQQATAFSSE

Nucleotide


Download         Length: 1749 bp        

>NTDB_id=366293 M594_RS03685 WP_173876006.1 750994..752742(+) (rcrQ) [Streptococcus mitis strain S022-V3-A4]
ATGAGACGACAAACTGCAAACCAGACGCTCAAACGTTTGGCAAAAGATTTAGCAAGTCATCCGTTCCTTCTTTTTCTAGC
CTTTCTAGGAACTATTGCCCAAGTTGGCTTATCAATTTATTTACCTATCCTGATTGGGCAGGTTATAGATCAAGTCCTAG
TGGCTGGATCTTCACCAGTTTTTTGGCAAATTTTTCTCCAGATGCTCTTGGTAGTCATAGGAAATACTCTGGTACAATGG
GCCAATCCTCTTCTTTATAATCGTCTAATCTTCTCTTATACCAGAGACTTGCGAGAGCGAATCATCCATAAGCTCCATCG
GCTACCGATTGCCTTTGTGGATCGGCAAGGCGGTGGCGAGATGGTCAGTCGTGTAACCACGGACATAGAACAGTTGGCAG
CTGGTTTGACCATGATTTTTAACCAATTTTTCATTGGTGTTTTGATGATTTTGGTAAGTATTCTAGCCATGCTTCAAATT
CACCTCCTCATGACCCTCTTAGTCTTGCTGTTGACGCCACTGTCTATGGTGATTTCACGCTTTATTGCTAAACGCTCCTA
TCATCTCTTTCAGAAGCAAACAGAGACGAGAGGCATTCAGACTCAGTTGATTGAAGAATCGCTTAGCCAGCAGACGATTA
TCCAGTCCTTCAATGCTCAGGAAGAGTTTATGAAAAGATTGCATGAGGCGAATGCCAACTACGCAGGCTATTCTCAGTCT
GCCATCTTTTATTCTTCAACGGTTAATCCTTCGACTCGCTTTGTCAATGCACTCATTTATGCGCTTTTAGCTGGAGTAGG
AGCTTATCGTATCATGATGGGGTCCACCTTGACCATTGGGCGTTTAGTGACTTTTTTGAATTATGTCCAACAGTACACCA
AGCCCTTTAACGATATTTCTTCAGTTCTAGCTGAGTTACAAAGTGCGTTAGCTTGTGCAGAGCGCATCTATGCTATCTTA
GAAAGTCCTGAAGTGGCTGAAACAGGCAAGGAAGTTTTGACCAGTGACCAGGTTAAGGGGGCTATTTCCTTTAAGCATGT
TTCTTTTGGCTACCATCCTGAAAAGATTTTGATTAAGGATTTGTCTATCGATATCCCAGCTGGTAGCAAGGTAGCTATCG
TTGGTCCGACAGGTGCTGGAAAATCAACTCTTATCAATCTCCTCATGCGTTTTTACCCTATTAACTCAGGAGATATCTTG
TTAGATGGGCAATCTATTTATGATTATACCCGAGCGTCATTGAGACAGCAGTTTGGGATGGTGCTCCAAGAGACCTGGCT
CAAGCAAGGGACCATTCATGACAATATTGCCTTTGGGAATCCTGATGCCAGTCGGGAGCAGGTGATTGCTGCTGCAAAGG
CAGCCAATGCAGACTTTTTCATCCAACAGTTGCCGCAGGGATACGATACCAAGTTGGAAAATGCAGGAGAATCTCTCTCT
GTCGGTCAGGCTCAACTTTTGACCATTGCGCGTGTCTTTCTGGCTATTCCAAAGATTCTTATCTTAGACGAGGCGACTTC
TTCTATCGATACACGGACAGAAGTATTGGTTCAGGATGCCTTTGCCAAGCTCATGAAGGGACGTACAAGTTTTATCATCG
CCCACCGCTTGTCAACCATTCAGGATGCGGATTTGATTCTTGTCTTGGTGGATGGCGACATTGTTGAGTATGGGAACCAT
CATGCCCTTATGGCTAAGAAGGGCAAGTATTACCAAATGCAGCAAGCTACAGCTTTTAGCTCTGAATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(359-507)

ABC transporter transmembrane region (ABC_membrane)

(24-295)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

37.61

97.766

0.368