Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   SMUNN2025_RS05700 Genome accession   NC_013928
Coordinates   1154877..1156679 (-) Length   600 a.a.
NCBI ID   WP_012997819.1    Uniprot ID   -
Organism   Streptococcus mutans NN2025     
Function   regulate competence (predicted from homology)   
Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type MGE coordinates Gene coordinates Relative position Distance (bp)
Prophage 1153133..1183131 1154877..1156679 within 0


Gene organization within MGE regions


Location: 1153133..1183131
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SMUNN2025_RS05695 (SmuNN2025_1103) rcrQ 1153133..1154887 (-) 1755 WP_002275251.1 ABC transporter ATP-binding protein Regulator
  SMUNN2025_RS05700 (SmuNN2025_1104) rcrP 1154877..1156679 (-) 1803 WP_012997819.1 ABC transporter ATP-binding protein Regulator
  SMUNN2025_RS05705 (SmuNN2025_1105) rcrR 1156683..1157117 (-) 435 WP_002263292.1 MarR family winged helix-turn-helix transcriptional regulator Regulator
  SMUNN2025_RS05710 (SmuNN2025_1106) queC 1157559..1158212 (+) 654 WP_002278449.1 7-cyano-7-deazaguanine synthase QueC -
  SMUNN2025_RS05715 (SmuNN2025_1107) queD 1158212..1158658 (+) 447 WP_002265145.1 6-carboxytetrahydropterin synthase QueD -
  SMUNN2025_RS05720 (SmuNN2025_1108) queE 1158655..1159371 (+) 717 WP_002283353.1 7-carboxy-7-deazaguanine synthase QueE -
  SMUNN2025_RS05725 (SmuNN2025_1109) queF 1159384..1159872 (+) 489 WP_002265143.1 preQ(1) synthase -
  SMUNN2025_RS05730 (SmuNN2025_1110) - 1159981..1160364 (+) 384 WP_002283352.1 DUF3021 family protein -
  SMUNN2025_RS05735 (SmuNN2025_1111) gdhA 1160474..1161823 (-) 1350 WP_012997821.1 NADP-specific glutamate dehydrogenase -
  SMUNN2025_RS05740 (SmuNN2025_1112) - 1162588..1163094 (+) 507 WP_002283300.1 DUF308 domain-containing protein -
  SMUNN2025_RS05745 (SmuNN2025_1113) gtfD 1163316..1167704 (-) 4389 WP_012997822.1 glucosyltransferase-S -
  SMUNN2025_RS05750 (SmuNN2025_1114) - 1167925..1168845 (-) 921 WP_002269023.1 AEC family transporter -
  SMUNN2025_RS05755 (SmuNN2025_1115) - 1168961..1170733 (-) 1773 WP_002283302.1 ABC transporter ATP-binding protein -
  SMUNN2025_RS05760 (SmuNN2025_1116) - 1170744..1172480 (-) 1737 WP_002283303.1 ABC transporter ATP-binding protein -
  SMUNN2025_RS05770 (SmuNN2025_1118) - 1172936..1174804 (-) 1869 WP_002283304.1 ABC-F family ATP-binding cassette domain-containing protein -
  SMUNN2025_RS05775 (SmuNN2025_1119) - 1174807..1176012 (-) 1206 WP_002283305.1 CCA tRNA nucleotidyltransferase -
  SMUNN2025_RS05780 (SmuNN2025_1120) dapB 1176009..1176776 (-) 768 WP_002279345.1 4-hydroxy-tetrahydrodipicolinate reductase -
  SMUNN2025_RS05785 (SmuNN2025_1121) - 1176788..1177633 (-) 846 WP_002266545.1 DegV family protein -
  SMUNN2025_RS05790 (SmuNN2025_1122) - 1177639..1178013 (-) 375 WP_002262891.1 DUF1149 family protein -
  SMUNN2025_RS05795 (SmuNN2025_1123) - 1178122..1179663 (-) 1542 WP_002277857.1 hypothetical protein -
  SMUNN2025_RS05800 (SmuNN2025_1124) - 1179650..1180018 (-) 369 Protein_1112 AAA family ATPase -
  SMUNN2025_RS05805 (SmuNN2025_1125) - 1180040..1180543 (-) 504 WP_002277859.1 phosphatase PAP2 family protein -
  SMUNN2025_RS05810 (SmuNN2025_1126) - 1180785..1181864 (-) 1080 WP_002262882.1 serine hydrolase domain-containing protein -
  SMUNN2025_RS05815 (SmuNN2025_1127) galE 1182130..1183131 (-) 1002 WP_002285560.1 UDP-glucose 4-epimerase GalE -

Sequence

Protein


Download         Length: 600 a.a.        Molecular weight: 66940.79 Da        Isoelectric Point: 9.7258

>NTDB_id=36596 SMUNN2025_RS05700 WP_012997819.1 1154877..1156679(-) (rcrP) [Streptococcus mutans NN2025]
MFKIFKRLNAKEWGMVLLSTAFICLAVWMDLKTPEYMSNITTLLQTKGTTASDIMDPGSKMLMFSFGSFFMAVLVGFLAS
RTAASFTTRLRSDIFNRVMDYSEAEIKKFSIPSLLTRTTNDLTQLQIMIVMGMQVVTRGPIMAVWALTKIWGKSDEWTGA
VGVAVLIVFIMLSVLMFVAFPRQRQVQSLTDALNSTTRESLTGVRVVRAYNAEDYQDTKFKRENKSLTKLNLLVYRLMSL
MNPVMTVVSSGLTLAIYWIGAYLLNDIKIPMTSVTAAKGAIADRISVFSDMVVFSSYAMQVVVGFMMMVAIFIILPRALV
SAKRINEVLALNSSVHFKEYSKADNARKGEVEFHDVSFRYSKNSRAVIEHVSFSAKAGETVAFIGSTGSGKSTLVNLIPR
FYDATEGWIKIDGIKVQNYSHDDLNNKVGYIPQKAVLFSGTIRSNIAFGQSDQAPLDDAKIWEALELAQAKNFVEEKEKG
LDTEVAQGGTNFSGGQKQRLAIARALARKPEILIFDDSFSALDYKTDRILRNDLVKKTKEMTKLIVAQRISTIMDADHIL
VLDQGKVVGQGTHKELLANNDIYQEIAYSQLSKEELENGK

Nucleotide


Download         Length: 1803 bp        

>NTDB_id=36596 SMUNN2025_RS05700 WP_012997819.1 1154877..1156679(-) (rcrP) [Streptococcus mutans NN2025]
ATGTTTAAAATTTTTAAACGTCTAAATGCTAAAGAATGGGGCATGGTTCTCCTTAGTACTGCCTTTATCTGTTTGGCTGT
CTGGATGGATTTGAAGACGCCCGAATATATGTCCAACATTACAACCTTGCTGCAGACTAAGGGAACGACCGCCTCAGATA
TTATGGATCCGGGATCTAAGATGCTCATGTTTTCATTTGGGAGCTTTTTTATGGCCGTTCTAGTTGGTTTTTTAGCTTCA
AGAACAGCTGCTAGCTTTACGACCCGTCTTCGATCTGATATTTTCAATCGGGTTATGGATTATTCAGAGGCGGAAATCAA
GAAATTTTCCATTCCCAGCCTTCTAACGCGTACGACTAATGATTTGACACAGTTGCAAATCATGATCGTTATGGGAATGC
AAGTGGTGACACGCGGTCCAATCATGGCTGTTTGGGCCTTGACTAAAATCTGGGGTAAAAGCGATGAATGGACAGGAGCA
GTCGGTGTTGCCGTTTTAATTGTCTTTATTATGCTGTCTGTTTTGATGTTTGTCGCTTTTCCAAGACAGCGTCAGGTGCA
GAGCTTGACGGATGCTCTAAATTCTACAACCCGTGAATCTCTGACTGGTGTTCGTGTTGTTCGGGCTTACAATGCAGAAG
ATTATCAGGACACTAAATTTAAGCGGGAAAATAAAAGCCTGACGAAATTGAATTTATTGGTCTATCGTCTGATGTCGCTA
ATGAATCCTGTCATGACAGTTGTTTCCAGTGGTCTAACTTTAGCTATTTATTGGATTGGAGCTTACCTGCTCAATGATAT
TAAAATTCCTATGACGAGTGTGACAGCTGCTAAAGGAGCTATTGCTGATCGTATCAGTGTTTTTAGTGATATGGTTGTCT
TTTCATCTTATGCCATGCAGGTTGTTGTCGGTTTTATGATGATGGTCGCTATCTTTATCATTTTACCGCGTGCTTTAGTT
TCTGCCAAACGAATTAATGAAGTATTGGCGCTTAACTCATCTGTACACTTCAAAGAATATTCTAAAGCAGACAATGCTCG
AAAAGGAGAAGTCGAATTTCATGATGTATCGTTTCGTTACAGTAAAAATTCTCGTGCGGTTATTGAGCATGTGTCTTTCA
GTGCTAAAGCTGGTGAGACAGTTGCTTTTATTGGTTCCACTGGCTCAGGAAAATCAACTCTTGTTAATCTGATTCCTCGT
TTTTATGATGCTACAGAAGGTTGGATTAAGATAGATGGCATCAAAGTGCAAAATTACAGCCATGATGACCTCAACAATAA
AGTCGGCTATATTCCGCAAAAGGCAGTGCTTTTTAGTGGGACCATTCGTTCTAATATTGCATTTGGGCAAAGCGATCAAG
CGCCGCTTGATGATGCTAAAATTTGGGAGGCTCTTGAACTAGCCCAAGCCAAAAACTTTGTTGAAGAAAAAGAAAAGGGT
CTGGATACCGAGGTAGCTCAAGGCGGTACCAACTTCTCTGGCGGTCAAAAGCAGCGCTTAGCTATTGCCCGTGCACTTGC
ACGCAAACCAGAAATTCTTATTTTTGATGACTCCTTCTCAGCTCTTGATTATAAGACGGATCGCATTCTGCGAAATGATT
TGGTAAAGAAAACCAAAGAAATGACTAAGTTGATTGTAGCCCAACGTATTTCAACTATTATGGATGCTGATCATATTTTA
GTCTTAGATCAAGGAAAGGTTGTTGGTCAAGGAACACACAAGGAATTACTGGCTAATAACGATATTTATCAAGAAATTGC
TTATTCACAACTATCTAAGGAGGAGTTAGAAAATGGAAAATAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(369-518)

ABC transporter transmembrane region (ABC_membrane)

(17-266)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

99.333

100

0.993

Multiple sequence alignment