Detailed information    

insolico Bioinformatically predicted

Overview

Name   ctsG   Type   Machinery gene
Locus tag   FBF21_RS07080 Genome accession   NZ_CP040611
Coordinates   1375179..1375694 (-) Length   171 a.a.
NCBI ID   WP_043012922.1    Uniprot ID   A0A5T1ZA66
Organism   Campylobacter sp. CFSAN093238     
Function   type II secretion system/type IV pilin; DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1370179..1380694
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FBF21_RS07065 (FBF21_07100) - 1370284..1372104 (-) 1821 WP_168985464.1 motility associated factor glycosyltransferase family protein -
  FBF21_RS07070 (FBF21_07105) - 1372101..1373924 (-) 1824 WP_168985465.1 motility associated factor glycosyltransferase family protein -
  FBF21_RS07075 (FBF21_07110) - 1373934..1375179 (-) 1246 Protein_1390 DUF2920 family protein -
  FBF21_RS07080 (FBF21_07115) ctsG 1375179..1375694 (-) 516 WP_043012922.1 prepilin-type N-terminal cleavage/methylation domain-containing protein Machinery gene
  FBF21_RS07085 (FBF21_07120) tsaD 1375695..1376702 (-) 1008 WP_002886115.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD -
  FBF21_RS07090 (FBF21_07125) - 1376699..1378093 (-) 1395 WP_002909663.1 M99 family carboxypeptidase catalytic domain-containing protein -
  FBF21_RS07095 (FBF21_07130) dxr 1378095..1379165 (-) 1071 WP_002860792.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  FBF21_RS07100 (FBF21_07135) - 1379162..1379887 (-) 726 WP_002875974.1 phosphatidate cytidylyltransferase -
  FBF21_RS07105 (FBF21_07140) - 1379896..1380234 (-) 339 WP_002852397.1 hypothetical protein -

Sequence

Protein


Download         Length: 171 a.a.        Molecular weight: 18762.64 Da        Isoelectric Point: 7.2441

>NTDB_id=365651 FBF21_RS07080 WP_043012922.1 1375179..1375694(-) (ctsG) [Campylobacter sp. CFSAN093238]
MRKAFTILELVFVIVILGILAAIALPKMSSSKHEAEVSKSLNNLKTLINDISIYTLKNDHLSSIKTMSNVSGVENVDLSN
FNGIKEVNFRVGDDKECLKLVFINKADFILMGISSNEASKNAIINAANQSHEDLENIDFTSSSSNKACVILSKNENFKNL
ASKTYFLIGGM

Nucleotide


Download         Length: 516 bp        

>NTDB_id=365651 FBF21_RS07080 WP_043012922.1 1375179..1375694(-) (ctsG) [Campylobacter sp. CFSAN093238]
ATGAGAAAAGCTTTTACTATATTAGAACTTGTTTTTGTGATTGTTATCTTAGGAATTTTAGCCGCTATTGCTTTACCAAA
AATGAGTTCAAGTAAGCATGAAGCCGAGGTTAGTAAGTCTTTAAATAACCTTAAAACTTTGATCAACGATATAAGCATTT
ATACTTTGAAAAATGATCATTTAAGCTCTATAAAAACGATGAGTAATGTAAGCGGGGTTGAAAATGTTGATCTTAGTAAT
TTTAACGGTATAAAAGAAGTAAATTTTCGCGTAGGCGATGATAAAGAATGCTTAAAACTTGTTTTTATAAATAAAGCTGA
TTTTATACTCATGGGAATTTCAAGCAATGAAGCAAGTAAAAATGCTATCATCAACGCAGCTAATCAAAGCCATGAAGATT
TAGAAAATATAGACTTTACAAGCTCTTCTAGTAATAAAGCTTGTGTGATTTTAAGTAAGAATGAAAATTTTAAAAACCTA
GCGAGTAAAACTTATTTTTTAATAGGGGGAATGTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5T1ZA66

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ctsG Campylobacter jejuni subsp. jejuni 81-176

93.567

100

0.936

Multiple sequence alignment