Detailed information    

insolico Bioinformatically predicted

Overview

Name   ctsG   Type   Machinery gene
Locus tag   FBF06_RS07560 Genome accession   NZ_CP040610
Coordinates   1449505..1450020 (-) Length   171 a.a.
NCBI ID   WP_002875272.1    Uniprot ID   A0A5T0KSE7
Organism   Campylobacter sp. CFSAN093227     
Function   type II secretion system/type IV pilin; DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1444505..1455020
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FBF06_RS07545 (FBF06_07570) - 1444617..1446434 (-) 1818 WP_168977611.1 motility associated factor glycosyltransferase family protein -
  FBF06_RS07550 (FBF06_07575) - 1446431..1448254 (-) 1824 WP_168977612.1 motility associated factor glycosyltransferase family protein -
  FBF06_RS07555 (FBF06_07580) - 1448264..1449505 (-) 1242 WP_168977613.1 DUF2920 family protein -
  FBF06_RS07560 (FBF06_07585) ctsG 1449505..1450020 (-) 516 WP_002875272.1 prepilin-type N-terminal cleavage/methylation domain-containing protein Machinery gene
  FBF06_RS07565 (FBF06_07590) tsaD 1450021..1451028 (-) 1008 WP_168977614.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD -
  FBF06_RS07570 (FBF06_07595) - 1451025..1452419 (-) 1395 WP_168977615.1 M99 family carboxypeptidase catalytic domain-containing protein -
  FBF06_RS07575 (FBF06_07600) dxr 1452421..1453491 (-) 1071 WP_100649657.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  FBF06_RS07580 (FBF06_07605) - 1453488..1454213 (-) 726 WP_002834214.1 phosphatidate cytidylyltransferase -
  FBF06_RS07585 (FBF06_07610) - 1454222..1454560 (-) 339 WP_002852397.1 hypothetical protein -

Sequence

Protein


Download         Length: 171 a.a.        Molecular weight: 18650.51 Da        Isoelectric Point: 6.4682

>NTDB_id=365623 FBF06_RS07560 WP_002875272.1 1449505..1450020(-) (ctsG) [Campylobacter sp. CFSAN093227]
MKKAFTILELVFVIVILGILAAIALPKMSSSKDEAEVSKSLNNLKTLINDISIYTLKNDHLSSIKTMSNVSGVENVDLGN
FNGTKEVNFRVGDDKECLKLLFINKADFILMGISSNEASKNAIINAANQSHEDLENIDFTSSSSNKACVILSKNENFKNL
ASKTYLLIGGM

Nucleotide


Download         Length: 516 bp        

>NTDB_id=365623 FBF06_RS07560 WP_002875272.1 1449505..1450020(-) (ctsG) [Campylobacter sp. CFSAN093227]
ATGAAAAAAGCTTTTACCATATTAGAACTTGTTTTTGTGATTGTTATTTTAGGAATTTTAGCCGCTATTGCTTTACCAAA
AATGAGTTCAAGCAAGGATGAAGCTGAAGTTAGTAAGTCTTTAAATAACCTTAAAACTTTGATTAATGATATAAGTATTT
ATACTTTAAAAAATGATCATTTAAGCTCTATAAAAACGATGAGTAATGTAAGTGGGGTTGAAAATGTCGATCTTGGCAAT
TTTAATGGCACAAAAGAAGTAAATTTTCGCGTAGGCGATGATAAAGAATGCTTAAAACTTCTTTTTATAAATAAAGCTGA
TTTTATACTCATGGGAATTTCAAGCAATGAAGCAAGTAAAAATGCTATCATTAACGCAGCCAATCAAAGCCATGAAGATT
TAGAAAATATAGACTTTACAAGCTCTTCTAGTAATAAAGCTTGTGTGATCTTAAGTAAGAATGAAAATTTTAAAAACCTA
GCGAGTAAAACTTATCTTTTAATAGGGGGAATGTAA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-25)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5T0KSE7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ctsG Campylobacter jejuni subsp. jejuni 81-176

93.567

100

0.936

Multiple sequence alignment