Detailed information    

insolico Bioinformatically predicted

Overview

Name   ctsG   Type   Machinery gene
Locus tag   FBF11_RS06485 Genome accession   NZ_CP040607
Coordinates   1263767..1264270 (-) Length   167 a.a.
NCBI ID   WP_052798162.1    Uniprot ID   A0A5Y4VLA8
Organism   Campylobacter sp. CFSAN093224     
Function   type II secretion system/type IV pilin; DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1258767..1269270
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FBF11_RS06470 (FBF11_06520) - 1258860..1260587 (-) 1728 WP_168977470.1 flagellin A -
  FBF11_RS06475 (FBF11_06525) - 1260670..1262496 (-) 1827 WP_057042275.1 motility associated factor glycosyltransferase family protein -
  FBF11_RS06480 (FBF11_06530) - 1262506..1263756 (-) 1251 WP_057042276.1 DUF2920 family protein -
  FBF11_RS06485 (FBF11_06535) ctsG 1263767..1264270 (-) 504 WP_052798162.1 prepilin-type N-terminal cleavage/methylation domain-containing protein Machinery gene
  FBF11_RS06490 (FBF11_06540) tsaD 1264271..1265278 (-) 1008 WP_002865639.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD -
  FBF11_RS06495 (FBF11_06545) - 1265275..1266669 (-) 1395 WP_057042277.1 M99 family carboxypeptidase catalytic domain-containing protein -
  FBF11_RS06500 (FBF11_06550) dxr 1266671..1267741 (-) 1071 WP_002873627.1 1-deoxy-D-xylulose-5-phosphate reductoisomerase -
  FBF11_RS06505 (FBF11_06555) - 1267738..1268463 (-) 726 WP_002834214.1 phosphatidate cytidylyltransferase -
  FBF11_RS06510 (FBF11_06560) - 1268472..1268810 (-) 339 WP_002852397.1 hypothetical protein -

Sequence

Protein


Download         Length: 167 a.a.        Molecular weight: 18384.24 Da        Isoelectric Point: 7.2439

>NTDB_id=365567 FBF11_RS06485 WP_052798162.1 1263767..1264270(-) (ctsG) [Campylobacter sp. CFSAN093224]
MKKAFTILELVFVIVILGILAAIALPKMSSSKHEAEVSKSLNNLKTLINDISIYTLKNDHLSSIKTMSNVSGVENVDLSN
FNGIKEVNFRVSDDKECLKLVFINKADFILMGISSNEASKNAIINAANQSHEDLENIDFTSSSSNKACVILSKNENFKNL
ASKIYLL

Nucleotide


Download         Length: 504 bp        

>NTDB_id=365567 FBF11_RS06485 WP_052798162.1 1263767..1264270(-) (ctsG) [Campylobacter sp. CFSAN093224]
ATGAAAAAAGCTTTTACCATATTAGAACTTGTTTTTGTGATTGTTATTTTGGGAATTTTAGCCGCTATTGCTTTACCAAA
AATGAGTTCAAGCAAGCATGAAGCCGAGGTTAGTAAGTCTTTAAACAACCTTAAAACTTTGATCAACGATATAAGCATTT
ATACTTTGAAAAATGATCATTTAAGCTCTATAAAAACGATGAGTAATGTAAGCGGAGTTGAAAATGTTGATCTTAGTAAT
TTTAACGGTATAAAAGAAGTAAATTTTCGCGTAAGCGATGATAAAGAATGCTTAAAACTTGTTTTTATAAATAAGGCTGA
TTTTATACTCATGGGAATTTCAAGCAATGAAGCAAGTAAAAATGCCATCATCAACGCAGCCAATCAAAGCCATGAAGATT
TAGAAAATATAGACTTTACAAGCTCTTCTAGTAACAAAGCTTGCGTGATCTTAAGTAAGAATGAAAATTTTAAAAACCTA
GCGAGTAAAATTTATCTTTTATAG

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(2-25)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5Y4VLA8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ctsG Campylobacter jejuni subsp. jejuni 81-176

92.216

100

0.922

Multiple sequence alignment