Detailed information NTG0364814

Bioinformatically predicted

Overview

• Name: codY
• Type: Regulator
• Locus tag: BPGQ101_RS08475
• Genome accession: NZ_CP040514
• Coordinates: 1635086..1635865 (+)
• Length: 259 a.a.
• NCBI ID: WP_007499612.1
• Uniprot ID: A0A9X0FX88
• Organism: Bacillus altitudinis strain GQYP101
• Function: repression of comK (predicted from homology) Competence regulation

Genomic Context

Location: 1630086..1640865

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BPGQ101_RS08455 (BPGQ101_08460)	trmFO	1630790..1632094 (+)	1305	WP_007499618.1	FADH(2)-oxidizing methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))- methyltransferase TrmFO	-
BPGQ101_RS08460 (BPGQ101_08465)	xerC	1632157..1633074 (+)	918	WP_007499616.1	tyrosine recombinase XerC	-
BPGQ101_RS08465 (BPGQ101_08470)	hslV	1633089..1633634 (+)	546	WP_007499614.1	ATP-dependent protease subunit HslV	-
BPGQ101_RS08470 (BPGQ101_08475)	hslU	1633651..1635051 (+)	1401	WP_138278512.1	HslU--HslV peptidase ATPase subunit	-
BPGQ101_RS08475 (BPGQ101_08480)	codY	1635086..1635865 (+)	780	WP_007499612.1	GTP-sensing pleiotropic transcriptional regulator CodY	Regulator
BPGQ101_RS08480 (BPGQ101_08485)	flgB	1636156..1636545 (+)	390	WP_208755866.1	flagellar basal body rod protein FlgB	-
BPGQ101_RS08485 (BPGQ101_08490)	flgC	1636545..1636997 (+)	453	WP_007499610.1	flagellar basal body rod protein FlgC	-
BPGQ101_RS08490 (BPGQ101_08495)	fliE	1637009..1637326 (+)	318	WP_007499609.1	flagellar hook-basal body complex protein FliE	-
BPGQ101_RS08495 (BPGQ101_08500)	fliF	1637377..1638969 (+)	1593	WP_017359091.1	flagellar basal-body MS-ring/collar protein FliF	-
BPGQ101_RS08500 (BPGQ101_08505)	fliG	1638981..1639997 (+)	1017	WP_034281776.1	flagellar motor switch protein FliG	-
BPGQ101_RS08505 (BPGQ101_08510)	fliH	1639990..1640754 (+)	765	WP_138278514.1	flagellar assembly protein FliH	-

Sequence

Protein

• Length: 259 a.a.
• Molecular weight: 28976.19 Da
• Isoelectric Point: 4.6467

>NTDB_id=364814 BPGQ101_RS08475 WP_007499612.1 1635086..1635865(+) (codY) [Bacillus altitudinis strain GQYP101]
MALLQKTRIINSMLQDAAGKPVNFKEMAETLRDVIDSNIFVLSRRGKLLGYSINQQIENARMKKMLEDRQFPEEYTKSLF
NVPETSSNLDINSEYTAFPIENRDLFQSGLTTIVPIIGGGDRLGTLILSRLQDTFTDDDLILAEYGATVVGMEILREKAE
EIEEEARSKAVVQMAISSLSYSELEAIEHIFEELDGNEGLLVASKIADRVGITRSVIVNALRKLESAGVIESRSLGMKGT
YIKVLNNKFLIELENLKSH

Nucleotide

• Length: 780 bp

>NTDB_id=364814 BPGQ101_RS08475 WP_007499612.1 1635086..1635865(+) (codY) [Bacillus altitudinis strain GQYP101]
ATGGCGTTACTACAAAAAACAAGGATTATTAACTCGATGCTGCAAGATGCAGCGGGGAAGCCGGTTAATTTTAAAGAAAT
GGCAGAAACATTGAGAGATGTCATTGATTCAAACATTTTCGTATTAAGCAGAAGAGGGAAACTTCTTGGCTACTCCATTA
ACCAGCAGATTGAAAATGCACGTATGAAAAAAATGCTGGAAGATCGTCAGTTCCCTGAAGAATATACAAAAAGCTTATTC
AATGTCCCTGAAACATCTTCAAACCTTGACATCAATAGTGAGTACACAGCTTTCCCGATTGAGAACCGTGATTTATTCCA
ATCAGGTTTGACAACGATTGTACCAATCATCGGAGGCGGAGACCGCTTAGGGACGTTAATCCTTTCTCGTTTGCAAGATA
CATTCACAGATGATGATTTAATTCTTGCTGAATACGGCGCAACAGTTGTTGGAATGGAGATTCTTCGCGAGAAAGCGGAA
GAAATTGAAGAAGAAGCAAGAAGTAAAGCGGTTGTTCAAATGGCAATCAGCTCTCTTTCATATAGTGAGCTTGAAGCGAT
TGAGCATATCTTTGAAGAACTTGATGGAAACGAAGGGCTGCTTGTGGCAAGTAAGATTGCTGACCGTGTAGGAATCACTC
GTTCAGTGATCGTAAACGCACTTCGTAAATTAGAAAGTGCAGGCGTTATTGAATCTCGTTCCCTTGGAATGAAGGGAACA
TACATCAAAGTATTAAACAACAAATTTTTAATTGAACTTGAAAATTTAAAATCTCACTAA

Domains

Predicted by InterProScan.

• CodY helix-turn-helix domain (HTH_CodY) (198-255)

• CodY GAF-like domain (CodY) (3-178)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
codY	Bacillus subtilis subsp. subtilis str. 168	96.525	100	0.965
codY	Lactococcus lactis subsp. lactis strain DGCC12653	48.031	98.069	0.471