Detailed information NTG0363340

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: EUC40_RS05115
• Genome accession: NZ_CP040336
• Coordinates: 998776..1001112 (+)
• Length: 778 a.a.
• NCBI ID: WP_156573952.1
• Uniprot ID: -
• Organism: Bacillus luti strain FJ
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 993776..1006112

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EUC40_RS05095	-	995182..995598 (+)	417	WP_000704116.1	Rrf2 family transcriptional regulator	-
EUC40_RS05100	-	995634..996779 (+)	1146	WP_071712920.1	cysteine desulfurase family protein	-
EUC40_RS05105	mnmA	996796..997911 (+)	1116	WP_156573950.1	tRNA 2-thiouridine(34) synthase MnmA	-
EUC40_RS05110	-	998021..998680 (+)	660	WP_016086179.1	tetratricopeptide repeat protein	-
EUC40_RS05115	recD2	998776..1001112 (+)	2337	WP_156573952.1	ATP-dependent RecD-like DNA helicase	Machinery gene
EUC40_RS05120	-	1001240..1001428 (+)	189	WP_000469281.1	hypothetical protein	-
EUC40_RS05125	-	1001447..1001575 (+)	129	WP_001026264.1	YrzQ family protein	-
EUC40_RS05130	-	1001610..1001822 (-)	213	WP_000242555.1	hypothetical protein	-
EUC40_RS05135	-	1001999..1003066 (+)	1068	WP_071712922.1	AI-2E family transporter	-
EUC40_RS05140	-	1003110..1003454 (-)	345	WP_156573954.1	PH domain-containing protein	-

Sequence

Protein

• Length: 778 a.a.
• Molecular weight: 87288.78 Da
• Isoelectric Point: 5.2586

>NTDB_id=363340 EUC40_RS05115 WP_156573952.1 998776..1001112(+) (recD2) [Bacillus luti strain FJ]
MGNQHAMDLFEEEKKFIKAQVLHTIFHNEENLYSVVSMKIIETNETYDEKKVLINGHFPRMHEDEVFTLTGHFKDHPKYG
KQYLVETFKKELPQTKAGMVQYLASDLFKGIGKRTAEKIVDHLGEHAISKIMDDPDALNGVVNKQKAQEIYETIVEHQGL
EKVMSFLNGYGFGTKLSIKIYQQYKEMTLEVIRNNPYQLIEEVDGIGFGRADDIGRALGISGNHDDRVRAGCFYTLENVS
LQLGHVYMGKDQLVRETMSLLNNQEGRVTEEDIIACVEMMQSEGKVIIEEERVYLASLFYSEKGVVKSIRRLMNQEETPS
FPEAEVLKTLGEIEEQLNVQYAPFQQEAIQTALHKPMMLLTGGPGTGKTTVIKGIVEMYASLHGLSLNPNEYSDDNPFPI
LLTAPTGRAAKRMSESTGLPACTIHRLLGWTPEGSFQRNETDPVQGKLLIIDEFSMVDIWLANQLFKSLPTNIQVIVVGD
EDQLPSVGPGQVLKDLLNAGAVPTVKLTEIYRQAEGSSVIQLAHAIKGGTLPPDLAQNKKDRSFISCTGAQIVEVVKKVC
ENAKTKGFSARDVQVLAPMYRGPAGINVLNEALQQVFNPKREKSKEIAYGDVVYRRGDKVLQLVNQPESQVFNGDIGEIV
SVFYAKENVEQQDMIIVSFDGIEVTYTKPDLNQITHAYCCSIHKSQGSEFPIVIMPIVKSYNRMLRRNLIYTGITRSKKF
LIICGEEAAFQSGVNRLDDAMRQTTLASRLQESQGEVQMVTVNGEEMDVENISPYDFM

Nucleotide

• Length: 2337 bp

>NTDB_id=363340 EUC40_RS05115 WP_156573952.1 998776..1001112(+) (recD2) [Bacillus luti strain FJ]
ATGGGAAATCAACATGCAATGGATTTGTTCGAGGAAGAGAAAAAATTTATAAAAGCGCAAGTTCTTCATACCATTTTCCA
CAACGAAGAAAACCTCTATTCCGTTGTCAGTATGAAAATCATTGAAACAAATGAAACGTACGATGAAAAAAAAGTACTGA
TAAACGGTCATTTTCCCCGCATGCATGAAGATGAAGTGTTTACATTGACAGGTCATTTTAAAGATCATCCAAAGTATGGG
AAACAATATTTGGTTGAAACGTTTAAAAAAGAGTTGCCGCAAACAAAAGCCGGTATGGTGCAATATTTAGCGAGTGATTT
ATTTAAAGGCATAGGAAAGCGTACAGCTGAAAAAATTGTGGACCATCTTGGGGAACATGCTATTTCTAAAATTATGGATG
ATCCTGATGCGTTAAATGGTGTTGTCAACAAGCAAAAAGCGCAGGAAATATATGAGACAATCGTTGAGCATCAAGGGTTA
GAGAAAGTAATGAGCTTTTTAAATGGTTACGGTTTTGGAACGAAGCTTTCTATTAAAATTTATCAGCAATATAAAGAGAT
GACATTAGAAGTGATTCGGAATAATCCATATCAACTTATCGAAGAGGTTGACGGGATTGGATTTGGAAGAGCAGATGATA
TAGGACGTGCGTTAGGGATATCGGGTAATCATGATGACCGTGTGCGGGCGGGATGTTTTTATACGTTAGAGAATGTATCC
TTGCAACTTGGCCACGTTTATATGGGAAAAGATCAACTTGTAAGAGAAACGATGTCACTTTTAAATAATCAAGAAGGAAG
AGTGACGGAGGAAGATATTATAGCCTGCGTTGAAATGATGCAAAGTGAAGGGAAAGTCATCATTGAAGAAGAACGAGTGT
ATTTAGCATCATTGTTCTACTCTGAAAAGGGTGTTGTAAAGTCTATTCGCAGGCTCATGAATCAAGAAGAAACACCTTCA
TTCCCTGAAGCGGAAGTGTTAAAGACATTAGGTGAAATTGAAGAACAGCTGAATGTACAATATGCACCATTTCAGCAAGA
AGCAATTCAAACGGCGCTTCATAAGCCGATGATGCTATTAACAGGTGGACCAGGAACAGGAAAAACAACTGTTATTAAAG
GTATTGTTGAAATGTATGCGTCACTTCACGGGTTATCGTTAAATCCGAATGAATATAGTGATGATAATCCATTTCCGATA
TTATTAACGGCTCCAACAGGAAGAGCAGCGAAGCGAATGAGCGAATCAACAGGACTTCCGGCTTGCACAATTCATCGTTT
GCTTGGCTGGACGCCAGAAGGATCTTTTCAGCGCAATGAAACGGATCCGGTTCAAGGGAAGTTACTCATTATTGACGAGT
TTTCGATGGTTGATATTTGGCTTGCAAATCAGCTGTTTAAGTCATTGCCGACAAACATTCAAGTTATCGTTGTAGGTGAT
GAAGATCAGTTACCATCTGTAGGACCTGGACAAGTGTTAAAAGATTTATTAAATGCAGGTGCAGTTCCGACAGTAAAGCT
TACAGAAATTTATCGTCAAGCAGAAGGGTCATCTGTTATTCAACTTGCCCATGCAATAAAAGGCGGCACGCTTCCGCCAG
ATTTAGCGCAAAATAAAAAAGATCGTTCGTTTATTAGCTGTACAGGGGCTCAAATTGTTGAGGTTGTCAAAAAGGTTTGT
GAAAATGCTAAGACAAAAGGTTTTAGTGCAAGAGATGTACAAGTATTAGCACCAATGTACCGCGGACCTGCTGGCATTAA
TGTACTGAATGAAGCGCTGCAACAAGTATTTAATCCGAAAAGGGAAAAGAGTAAAGAAATTGCTTACGGTGATGTTGTAT
ACCGAAGAGGCGATAAAGTGCTGCAACTCGTCAATCAGCCAGAAAGCCAAGTGTTTAATGGTGATATTGGAGAAATTGTT
TCGGTATTTTATGCGAAAGAAAATGTTGAACAACAAGATATGATTATCGTTTCATTTGATGGAATTGAAGTTACGTATAC
GAAACCAGATTTAAATCAAATTACACATGCATATTGCTGTTCCATTCATAAATCACAAGGTAGTGAATTTCCGATTGTGA
TTATGCCGATTGTAAAAAGTTACAACCGTATGTTACGTCGTAATTTAATTTACACGGGCATTACAAGAAGTAAGAAGTTC
CTTATTATTTGCGGGGAGGAAGCTGCTTTCCAGTCTGGTGTAAATCGCCTTGATGATGCGATGCGTCAAACGACTTTAGC
TAGTCGATTGCAGGAATCACAAGGAGAAGTACAGATGGTAACAGTTAATGGCGAAGAAATGGACGTGGAAAACATTTCAC
CGTATGATTTCATGTAA

Domains

Predicted by InterproScan.

• AAA domain (AAA_30) (341-548)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (589-659)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (676-724)

• Helix-hairpin-helix containing domain (HHH_RecD2) (156-247)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	56.764	100	0.577