Detailed information NTG0362805

Bioinformatically predicted

Overview

• Name: proC
• Type: Machinery gene
• Locus tag: FD987_RS05485
• Genome accession: NZ_CP040239
• Coordinates: 1071580..1072317 (+)
• Length: 245 a.a.
• NCBI ID: WP_002780246.1
• Uniprot ID: A0A5T1L8T6
• Organism: Campylobacter coli strain S9
• Function: DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1066580..1077317

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FD987_RS05455 (FD987_05455)	rpsF	1066728..1067105 (+)	378	WP_002777082.1	30S ribosomal protein S6	-
FD987_RS05460 (FD987_05460)	-	1067114..1067662 (+)	549	WP_002777084.1	single-stranded DNA-binding protein	-
FD987_RS05465 (FD987_05465)	rpsR	1067673..1067933 (+)	261	WP_002777087.1	30S ribosomal protein S18	-
FD987_RS05470 (FD987_05470)	lon	1067989..1070364 (-)	2376	WP_023361985.1	endopeptidase La	-
FD987_RS05475 (FD987_05475)	-	1070380..1071027 (-)	648	WP_002780248.1	outer membrane protein assembly factor BamD	-
FD987_RS05480 (FD987_05480)	fliW	1071191..1071580 (+)	390	WP_002777093.1	flagellar assembly protein FliW	-
FD987_RS05485 (FD987_05485)	proC	1071580..1072317 (+)	738	WP_002780246.1	pyrroline-5-carboxylate reductase	Machinery gene
FD987_RS05490 (FD987_05490)	-	1072314..1072619 (+)	306	WP_002790525.1	hypothetical protein	-
FD987_RS05495 (FD987_05495)	-	1072612..1073280 (+)	669	WP_002780245.1	hypothetical protein	-
FD987_RS05500 (FD987_05500)	-	1073277..1073729 (+)	453	WP_002777117.1	hypothetical protein	-
FD987_RS05505 (FD987_05505)	-	1073722..1074351 (-)	630	WP_002783358.1	uroporphyrinogen-III synthase	-
FD987_RS05510 (FD987_05510)	thiE	1074329..1074961 (-)	633	WP_002783359.1	thiamine phosphate synthase	-
FD987_RS05515 (FD987_05515)	thiD	1074951..1075763 (-)	813	WP_002786353.1	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	-
FD987_RS05520 (FD987_05520)	-	1075763..1076446 (-)	684	WP_002777124.1	3-methyladenine DNA glycosylase	-
FD987_RS05525 (FD987_05525)	-	1076443..1077204 (-)	762	WP_072212081.1	ATP-binding protein	-

Sequence

Protein

• Length: 245 a.a.
• Molecular weight: 26797.20 Da
• Isoelectric Point: 9.3032

>NTDB_id=362805 FD987_RS05485 WP_002780246.1 1071580..1072317(+) (proC) [Campylobacter coli strain S9]
MKADLYILANGAMAQALAYGLKDSYNIYIVGRNLEKLQILEKEGFKTLLYKDFNIENKNIILAFKPYALESVAANLKGKA
KILISVLANTDFDKLKLIQAQNYARIMPNTAAKYKASTTPYVLKNSNFKDEVIEILNTFGKAYELNEEKQMNAAMAISGC
APAFLALVAESIANAGVYEGLSKELSLNLTRSLFKSAAALLENEHPAIIKENICSPAGVTIKGIKVLEQKGIRGTFFEAL
NASAT

Nucleotide

• Length: 738 bp

>NTDB_id=362805 FD987_RS05485 WP_002780246.1 1071580..1072317(+) (proC) [Campylobacter coli strain S9]
ATGAAAGCTGATTTATATATACTTGCTAATGGTGCGATGGCGCAAGCTTTGGCTTATGGATTAAAAGATTCTTATAATAT
CTATATAGTCGGTAGAAATTTAGAAAAGCTTCAAATTTTAGAAAAAGAAGGTTTTAAAACTTTACTCTATAAAGATTTTA
ATATAGAAAATAAAAATATTATCTTAGCTTTTAAACCTTATGCCTTAGAAAGTGTCGCAGCAAATTTAAAAGGCAAGGCA
AAAATTTTAATTTCAGTTTTAGCCAATACGGATTTTGATAAATTAAAACTTATCCAAGCCCAAAATTATGCAAGGATAAT
GCCAAATACAGCAGCTAAATATAAAGCTTCCACAACTCCTTATGTTTTAAAAAATTCAAATTTTAAAGATGAAGTCATAG
AAATTTTAAATACTTTTGGCAAAGCTTATGAGTTAAACGAAGAAAAACAAATGAATGCTGCCATGGCTATAAGCGGTTGC
GCTCCTGCTTTTTTAGCATTAGTAGCTGAAAGCATTGCTAATGCTGGCGTGTATGAAGGATTATCAAAAGAGCTGAGTTT
AAATCTCACTCGTTCGCTTTTTAAAAGTGCTGCAGCCTTGCTAGAAAACGAGCACCCAGCCATCATTAAGGAAAATATCT
GCTCGCCTGCAGGTGTTACCATAAAAGGGATTAAAGTATTAGAGCAAAAAGGTATCCGTGGGACTTTTTTTGAGGCTCTT
AATGCTAGTGCAACATGA

Domains

Predicted by InterproScan.

• NADP oxidoreductase coenzyme F420-dependent (F420_oxidored) (7-88)

• Pyrroline-5-carboxylate reductase dimerisation (P5CR_dimer) (148-244)

3D structure

• AlphaFold DB: A0A5T1L8T6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
proC	Campylobacter jejuni subsp. jejuni 81-176	80.833	97.959	0.792