Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | FDQ49_RS11225 | Genome accession | NZ_CP040105 |
| Coordinates | 2384849..2385274 (+) | Length | 141 a.a. |
| NCBI ID | WP_017392607.1 | Uniprot ID | A0A836MHH0 |
| Organism | Acinetobacter nosocomialis M2 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2379849..2390274
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FDQ49_RS11215 (FDQ49_11215) | pilY1 | 2380173..2384357 (+) | 4185 | WP_022575990.1 | PilC/PilY family type IV pilus protein | Machinery gene |
| FDQ49_RS11220 (FDQ49_11220) | pilY2 | 2384370..2384852 (+) | 483 | WP_022575989.1 | type IV pilin protein | Machinery gene |
| FDQ49_RS11225 (FDQ49_11225) | pilE | 2384849..2385274 (+) | 426 | WP_017392607.1 | type IV pilin protein | Machinery gene |
| FDQ49_RS11230 (FDQ49_11230) | rpsP | 2385421..2385672 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| FDQ49_RS11235 (FDQ49_11235) | rimM | 2385692..2386240 (+) | 549 | WP_004711694.1 | ribosome maturation factor RimM | - |
| FDQ49_RS11240 (FDQ49_11240) | trmD | 2386287..2387042 (+) | 756 | WP_002051760.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| FDQ49_RS11245 (FDQ49_11245) | rplS | 2387258..2387626 (+) | 369 | WP_002051668.1 | 50S ribosomal protein L19 | - |
| FDQ49_RS11250 (FDQ49_11250) | - | 2387678..2388619 (-) | 942 | WP_080660964.1 | triacylglycerol lipase | - |
| FDQ49_RS11255 (FDQ49_11255) | - | 2388734..2389768 (-) | 1035 | WP_002051740.1 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15229.43 Da Isoelectric Point: 7.7765
>NTDB_id=362244 FDQ49_RS11225 WP_017392607.1 2384849..2385274(+) (pilE) [Acinetobacter nosocomialis M2]
MKNGFTLIEIMVVVAIIAILVAIATPSYLQYVRKGNRTAVQSEMMNIAQTLESQKMVNNRYPSNATIQSIYGSNVSPLQG
KALYTLAFTTLNDSTWVLTATPIANTSQAGDGIICLNDQGQKFWAKGATDCALSASSSWTE
MKNGFTLIEIMVVVAIIAILVAIATPSYLQYVRKGNRTAVQSEMMNIAQTLESQKMVNNRYPSNATIQSIYGSNVSPLQG
KALYTLAFTTLNDSTWVLTATPIANTSQAGDGIICLNDQGQKFWAKGATDCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=362244 FDQ49_RS11225 WP_017392607.1 2384849..2385274(+) (pilE) [Acinetobacter nosocomialis M2]
GTGAAGAATGGTTTTACACTAATAGAAATTATGGTTGTGGTGGCAATTATTGCAATTTTGGTAGCGATAGCTACTCCATC
GTATTTACAATATGTTCGTAAAGGGAATCGTACAGCCGTTCAATCTGAAATGATGAATATTGCACAAACTTTAGAGTCTC
AAAAAATGGTGAATAACCGTTATCCCTCAAATGCAACTATACAATCAATTTATGGCTCTAATGTGAGTCCTCTTCAGGGC
AAAGCTTTATATACTTTAGCTTTTACTACTTTAAACGATTCGACATGGGTGCTTACGGCAACACCAATCGCTAATACTTC
ACAAGCGGGTGATGGAATTATTTGCTTAAATGATCAAGGGCAAAAATTTTGGGCAAAAGGTGCTACAGATTGTGCACTAT
CGGCTTCATCAAGTTGGACAGAGTAA
GTGAAGAATGGTTTTACACTAATAGAAATTATGGTTGTGGTGGCAATTATTGCAATTTTGGTAGCGATAGCTACTCCATC
GTATTTACAATATGTTCGTAAAGGGAATCGTACAGCCGTTCAATCTGAAATGATGAATATTGCACAAACTTTAGAGTCTC
AAAAAATGGTGAATAACCGTTATCCCTCAAATGCAACTATACAATCAATTTATGGCTCTAATGTGAGTCCTCTTCAGGGC
AAAGCTTTATATACTTTAGCTTTTACTACTTTAAACGATTCGACATGGGTGCTTACGGCAACACCAATCGCTAATACTTC
ACAAGCGGGTGATGGAATTATTTGCTTAAATGATCAAGGGCAAAAATTTTGGGCAAAAGGTGCTACAGATTGTGCACTAT
CGGCTTCATCAAGTTGGACAGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
97.163 |
100 |
0.972 |
| comF | Acinetobacter baylyi ADP1 |
52.857 |
99.291 |
0.525 |