Detailed information NTG0361932

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: FDM99_RS11195
• Genome accession: NZ_CP040080
• Coordinates: 2296595..2297296 (+)
• Length: 233 a.a.
• NCBI ID: WP_032025534.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain SP304
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2291595..2302296

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FDM99_RS11160 (FDM99_11160)	kdsB	2292118..2292879 (+)	762	WP_032025537.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
FDM99_RS11165 (FDM99_11165)	-	2292891..2293871 (+)	981	WP_001075416.1	DNA polymerase III subunit delta'	-
FDM99_RS11170 (FDM99_11170)	-	2293883..2294224 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
FDM99_RS11175 (FDM99_11175)	-	2294242..2295015 (+)	774	WP_000497298.1	TatD family hydrolase	-
FDM99_RS11180 (FDM99_11180)	-	2295053..2295661 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
FDM99_RS11185 (FDM99_11185)	-	2295671..2296225 (+)	555	WP_000841373.1	type II secretion system protein	-
FDM99_RS11190 (FDM99_11190)	xcpV	2296215..2296595 (+)	381	WP_032025535.1	type II secretion system minor pseudopilin GspI	Machinery gene
FDM99_RS11195 (FDM99_11195)	xcpW	2296595..2297296 (+)	702	WP_032025534.1	type II secretion system minor pseudopilin GspJ	Machinery gene
FDM99_RS11200 (FDM99_11200)	gspK	2297296..2298255 (+)	960	WP_032025533.1	type II secretion system minor pseudopilin GspK	-
FDM99_RS11205 (FDM99_11205)	-	2298485..2299081 (+)	597	WP_000908453.1	6-pyruvoyl trahydropterin synthase family protein	-
FDM99_RS11210 (FDM99_11210)	ung	2299132..2299845 (+)	714	WP_029424376.1	uracil-DNA glycosylase	-
FDM99_RS11215 (FDM99_11215)	-	2299842..2300966 (+)	1125	WP_086377635.1	enoyl-CoA hydratase/isomerase family protein	-
FDM99_RS11220 (FDM99_11220)	tadA	2300973..2301476 (+)	504	WP_032025531.1	tRNA adenosine(34) deaminase TadA	-
FDM99_RS11225 (FDM99_11225)	-	2301546..2301989 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26656.61 Da
• Isoelectric Point: 9.5501

>NTDB_id=361932 FDM99_RS11195 WP_032025534.1 2296595..2297296(+) (xcpW) [Acinetobacter baumannii strain SP304]
MIKNKYIHIRSFASRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLNQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=361932 FDM99_RS11195 WP_032025534.1 2296595..2297296(+) (xcpW) [Acinetobacter baumannii strain SP304]
ATGATAAAAAATAAATATATTCACATCCGCAGCTTTGCTTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGGCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGTAAAGCTGGGGTAACAGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAGTTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAATCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.142	100	0.991