Detailed information NTG0036161

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: BSNT_RS13950
• Genome accession: NC_017196
• Coordinates: 2571042..2572307 (+)
• Length: 421 a.a.
• NCBI ID: WP_014480427.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. natto BEST195
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2566042..2577307

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BSNT_RS13930 (BSNT_03991)	yrrB	2567413..2568033 (-)	621	WP_206697897.1	tetratricopeptide repeat protein	-
BSNT_RS13935 (BSNT_03992)	mnmA	2568119..2569234 (-)	1116	WP_014480424.1	tRNA 2-thiouridine(34) synthase MnmA	-
BSNT_RS13940 (BSNT_03993)	iscSA	2569265..2570404 (-)	1140	WP_014480425.1	cysteine desulfurase family protein	-
BSNT_RS13945 (BSNT_03994)	cymR	2570423..2570839 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
BSNT_RS13950 (BSNT_03996)	rarA	2571042..2572307 (+)	1266	WP_014480427.1	replication-associated recombination protein A	Machinery gene
BSNT_RS13955 (BSNT_03997)	tcdA	2572347..2573111 (-)	765	WP_014480428.1	tRNA threonylcarbamoyladenosine dehydratase	-
BSNT_RS13965 (BSNT_03999)	aspS	2573446..2575224 (-)	1779	WP_014480429.1	aspartate--tRNA ligase	-
BSNT_RS13970 (BSNT_04000)	hisS	2575238..2576512 (-)	1275	WP_014480430.1	histidine--tRNA ligase	-
BSNT_RS13975 (BSNT_04001)	yrzK	2576894..2577064 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46463.29 Da
• Isoelectric Point: 7.2043

>NTDB_id=36161 BSNT_RS13950 WP_014480427.1 2571042..2572307(+) (rarA) [Bacillus subtilis subsp. natto BEST195]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDSGWVEQQYLPDSLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=36161 BSNT_RS13950 WP_014480427.1 2571042..2572307(+) (rarA) [Bacillus subtilis subsp. natto BEST195]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGGATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGATCTGATTAAACAGGCACTGGAACGC
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCGATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAAGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGTGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAGCGGTTGGGTCGAACAACAATACCTCCCTGATTCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACAGGAAAATTCGAATCCGCCTTAAAGCAGGTGTATGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.287	100	0.993