Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | GTW26_RS29680 | Genome accession | NZ_CP047643 |
| Coordinates | 6290199..6290822 (-) | Length | 207 a.a. |
| NCBI ID | WP_003116135.1 | Uniprot ID | A0A0H2ZIF6 |
| Organism | Pseudomonas aeruginosa CI27 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 6285199..6295822
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GTW26_RS29660 (GTW26_29585) | aroB | 6285806..6286912 (-) | 1107 | WP_003107839.1 | 3-dehydroquinate synthase | - |
| GTW26_RS29665 (GTW26_29590) | aroK | 6286962..6287480 (-) | 519 | WP_003095833.1 | shikimate kinase AroK | - |
| GTW26_RS29670 (GTW26_29595) | pilQ | 6287492..6289624 (-) | 2133 | WP_003141780.1 | type 4a pilus secretin PilQ | Machinery gene |
| GTW26_RS29675 (GTW26_29600) | comL/pilP | 6289678..6290202 (-) | 525 | WP_003116136.1 | type 4a pilus biogenesis lipoprotein PilP | Machinery gene |
| GTW26_RS29680 (GTW26_29605) | pilO | 6290199..6290822 (-) | 624 | WP_003116135.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| GTW26_RS29685 (GTW26_29610) | pilN | 6290819..6291415 (-) | 597 | WP_003141783.1 | type 4a pilus biogenesis protein PilN | - |
| GTW26_RS29690 (GTW26_29615) | pilM | 6291415..6292479 (-) | 1065 | WP_003110888.1 | type IV pilus assembly protein PilM | Machinery gene |
| GTW26_RS29695 (GTW26_29620) | - | 6292664..6295135 (+) | 2472 | WP_003141786.1 | penicillin-binding protein 1A | - |
Sequence
Protein
Download Length: 207 a.a. Molecular weight: 22958.35 Da Isoelectric Point: 4.9107
>NTDB_id=360467 GTW26_RS29680 WP_003116135.1 6290199..6290822(-) (pilO) [Pseudomonas aeruginosa CI27]
MSLASSLESLRKIDVNDLDLNNIGSWPAAVKVIVCVLLTAAVLALGYNFHLRDLQTQLEQQAAQEESLKQQFATKAFQAA
NLEAYKAQMKEMEESFGALLRQLPSDTEVPGLLEDITRTGLGSGLEFEEIKLLPEVTQQFYIELPIQISVVGGYHDLATF
VSGVSSLPRIVTLHDFEIKPASPDNTSKLRMSILAKTYRYNDKGLKK
MSLASSLESLRKIDVNDLDLNNIGSWPAAVKVIVCVLLTAAVLALGYNFHLRDLQTQLEQQAAQEESLKQQFATKAFQAA
NLEAYKAQMKEMEESFGALLRQLPSDTEVPGLLEDITRTGLGSGLEFEEIKLLPEVTQQFYIELPIQISVVGGYHDLATF
VSGVSSLPRIVTLHDFEIKPASPDNTSKLRMSILAKTYRYNDKGLKK
Nucleotide
Download Length: 624 bp
>NTDB_id=360467 GTW26_RS29680 WP_003116135.1 6290199..6290822(-) (pilO) [Pseudomonas aeruginosa CI27]
ATGAGTCTGGCCAGTTCCCTGGAAAGTCTGCGCAAGATCGACGTAAACGACCTCGATCTGAACAACATCGGTTCCTGGCC
GGCGGCGGTCAAGGTCATCGTCTGCGTGCTGCTGACCGCGGCGGTCCTGGCGCTGGGCTACAACTTCCATCTCCGTGACT
TGCAAACACAGCTCGAACAGCAGGCTGCGCAAGAAGAATCGCTCAAGCAGCAATTTGCTACCAAAGCGTTCCAGGCCGCG
AACCTGGAAGCCTACAAGGCACAGATGAAGGAGATGGAGGAGTCCTTCGGCGCCTTGCTGCGGCAGTTGCCCAGCGACAC
CGAGGTACCCGGGCTGCTCGAGGACATCACTCGTACCGGTCTGGGCAGCGGCCTGGAGTTCGAGGAGATCAAGCTGCTCC
CTGAAGTCACTCAGCAGTTCTATATCGAGCTGCCGATCCAGATCAGCGTGGTCGGCGGCTACCACGACCTGGCGACCTTC
GTCAGCGGCGTGTCCAGCCTGCCGCGGATCGTTACCCTGCATGACTTCGAGATCAAGCCGGCTTCGCCCGATAACACCTC
GAAGCTGCGCATGAGCATCTTGGCCAAGACCTACCGCTACAACGACAAGGGGCTGAAGAAATGA
ATGAGTCTGGCCAGTTCCCTGGAAAGTCTGCGCAAGATCGACGTAAACGACCTCGATCTGAACAACATCGGTTCCTGGCC
GGCGGCGGTCAAGGTCATCGTCTGCGTGCTGCTGACCGCGGCGGTCCTGGCGCTGGGCTACAACTTCCATCTCCGTGACT
TGCAAACACAGCTCGAACAGCAGGCTGCGCAAGAAGAATCGCTCAAGCAGCAATTTGCTACCAAAGCGTTCCAGGCCGCG
AACCTGGAAGCCTACAAGGCACAGATGAAGGAGATGGAGGAGTCCTTCGGCGCCTTGCTGCGGCAGTTGCCCAGCGACAC
CGAGGTACCCGGGCTGCTCGAGGACATCACTCGTACCGGTCTGGGCAGCGGCCTGGAGTTCGAGGAGATCAAGCTGCTCC
CTGAAGTCACTCAGCAGTTCTATATCGAGCTGCCGATCCAGATCAGCGTGGTCGGCGGCTACCACGACCTGGCGACCTTC
GTCAGCGGCGTGTCCAGCCTGCCGCGGATCGTTACCCTGCATGACTTCGAGATCAAGCCGGCTTCGCCCGATAACACCTC
GAAGCTGCGCATGAGCATCTTGGCCAAGACCTACCGCTACAACGACAAGGGGCTGAAGAAATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Legionella pneumophila strain ERS1305867 |
45.596 |
93.237 |
0.425 |
| pilO | Acinetobacter baumannii D1279779 |
45.789 |
91.787 |
0.42 |
| comO/pilO | Acinetobacter baylyi ADP1 |
43.617 |
90.821 |
0.396 |