Detailed information NTG0360467

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: FAY30_RS17570
• Genome accession: NZ_CP039727
• Coordinates: 3603878..3606289 (-)
• Length: 803 a.a.
• NCBI ID: WP_149871091.1
• Uniprot ID: -
• Organism: Bacillus sp. S3
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3598878..3611289

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FAY30_RS17545 (FAY30_17545)	alaS	3598884..3601520 (-)	2637	WP_149871086.1	alanine--tRNA ligase	-
FAY30_RS17550 (FAY30_17550)	-	3601855..3602919 (-)	1065	WP_149871087.1	AI-2E family transporter	-
FAY30_RS17555 (FAY30_17555)	-	3603007..3603141 (-)	135	WP_149871088.1	YrzQ family protein	-
FAY30_RS17560 (FAY30_17560)	-	3603165..3603356 (-)	192	WP_149871089.1	hypothetical protein	-
FAY30_RS17565 (FAY30_17565)	-	3603368..3603844 (-)	477	WP_149871090.1	PRC-barrel domain-containing protein	-
FAY30_RS17570 (FAY30_17570)	recD2	3603878..3606289 (-)	2412	WP_149871091.1	ATP-dependent RecD-like DNA helicase	Machinery gene
FAY30_RS17575 (FAY30_17575)	-	3606324..3606977 (-)	654	WP_149871092.1	tetratricopeptide repeat protein	-
FAY30_RS17580 (FAY30_17580)	mnmA	3607059..3608177 (-)	1119	WP_149871093.1	tRNA 2-thiouridine(34) synthase MnmA	-
FAY30_RS17585 (FAY30_17585)	-	3608218..3609360 (-)	1143	WP_149871094.1	cysteine desulfurase family protein	-
FAY30_RS17590 (FAY30_17590)	cymR	3609403..3609822 (-)	420	WP_149871095.1	cysteine metabolism transcriptional regulator CymR	-
FAY30_RS17595 (FAY30_17595)	-	3609975..3611249 (+)	1275	WP_149871096.1	replication-associated recombination protein A	-

Sequence

Protein

• Length: 803 a.a.
• Molecular weight: 90757.68 Da
• Isoelectric Point: 4.9014

>NTDB_id=360467 FAY30_RS17570 WP_149871091.1 3603878..3606289(-) (recD2) [Bacillus sp. S3]
MEKQDSLDLFAEQGKFVKGRPIVTIFHNEQNLYTVLRIRVDETNDQYEDKEAVITGYFPKIHEQETYIFFGEFKEHPKFG
VQFHTNHFRKDMPQTKQGVIAYLSGEMFKGIGKKTAENIVETLGEDAISKILNQPSLLDSIPKLPPEKAKMLYDTLMEHQ
GLEQVMVALNQYGFGPQISMRIYQAYKEETLTTIQKNPYKLVEDIEGIGFGRADELGHQLGITGSHPDRIKAACLYTLES
ESMQTGHVYMHAQDLLEQVKALLEDNKRDQIEYINISNEVVKLEEEGKLMVEEKRIYLPSLFFAEKGLVTSINRILQQTE
FKDQFPESEFLLALGGLEERLGVQYAPTQKEAIQTALMSPMLMLTGGPGTGKTTVIKGIVELYGELHGCSLELKDYHKKD
EPFPFLLAAPTGRAAKRMTESTGLPAVTIHRLLGFNGSEGFDRDDASPLEGKILIVDETSMLDIWLANQLFKALPEHIQV
IMVGDEDQLPSVGPGQVLKDLLQSERIPTVRLTDIYRQAEGSSIIELAHDIKKGYLPANITAKQADRSFIKCSTAQVAQV
VEKVALNAKNKGYSAKDIQVLAPMYRGPAGIDRLNVLLQEIFNPNPDGKRKEITFGEAKYRIGDKVLQLVNQPESNVFNG
DIGEIISIIYAKENTEKQDMIYISFEGNEVEYTKQDLNQITHAYCCSVHKSQGSEFPIVILPITRSYYRMLRRNLIYTAI
TRSKQSLILCGEEDALRMGVERADELSRQTTLCQKLKESIAVKGDDSQEEQTDIEMSYEEELMHVNPMVGMENVSPYDFM
IND

Nucleotide

• Length: 2412 bp

>NTDB_id=360467 FAY30_RS17570 WP_149871091.1 3603878..3606289(-) (recD2) [Bacillus sp. S3]
ATGGAAAAACAAGACTCACTCGATTTATTCGCGGAGCAGGGGAAGTTCGTCAAAGGGCGGCCGATTGTGACGATTTTTCA
CAATGAACAAAATTTATACACCGTTTTAAGAATTCGCGTAGATGAAACAAACGATCAATATGAGGATAAAGAAGCGGTGA
TTACCGGCTATTTTCCAAAGATTCATGAACAGGAAACCTATATTTTCTTTGGGGAATTTAAGGAACATCCAAAGTTTGGG
GTGCAATTTCACACCAATCATTTCCGCAAAGATATGCCCCAGACTAAACAAGGAGTCATCGCCTATTTATCAGGGGAAAT
GTTTAAAGGAATTGGGAAGAAAACGGCTGAGAATATCGTTGAAACATTGGGAGAAGACGCTATTTCCAAGATTCTCAATC
AGCCCTCCTTGCTTGATTCTATTCCCAAGCTCCCTCCTGAAAAGGCAAAAATGCTCTATGACACTCTGATGGAGCATCAA
GGACTCGAGCAGGTAATGGTTGCCTTAAATCAATACGGCTTTGGACCACAGATCTCGATGCGGATTTACCAAGCATATAA
AGAGGAAACACTTACAACCATTCAAAAAAATCCATATAAACTGGTTGAAGATATCGAGGGTATTGGTTTTGGCCGTGCGG
ATGAGCTTGGCCACCAGCTGGGAATCACCGGAAGCCATCCCGACCGAATCAAAGCTGCCTGTCTTTATACCCTTGAAAGT
GAAAGCATGCAAACGGGACATGTTTACATGCATGCTCAGGATTTACTCGAACAAGTGAAAGCACTTCTTGAGGATAACAA
AAGGGATCAAATTGAATACATAAATATCTCAAATGAGGTTGTTAAACTCGAAGAGGAAGGAAAATTAATGGTGGAGGAGA
AACGCATTTATCTCCCATCATTATTTTTCGCGGAAAAAGGCCTTGTAACGAGCATTAATCGGATATTACAGCAAACAGAA
TTTAAGGATCAGTTCCCTGAATCAGAGTTTCTTCTGGCACTAGGGGGCTTAGAGGAACGTCTTGGCGTGCAATATGCACC
AACACAAAAAGAAGCGATTCAAACAGCGCTGATGTCACCGATGCTGATGTTAACAGGCGGACCTGGTACTGGGAAAACGA
CCGTGATTAAGGGAATCGTAGAACTATACGGAGAACTGCATGGCTGTTCTTTAGAACTGAAGGATTACCATAAGAAGGAT
GAGCCTTTTCCGTTTTTACTGGCAGCACCGACTGGGCGAGCCGCCAAACGAATGACCGAATCGACAGGATTACCTGCCGT
CACGATTCACCGGCTGCTTGGTTTTAACGGATCAGAAGGCTTTGATCGTGATGATGCCAGCCCACTTGAAGGAAAAATCT
TAATCGTGGATGAAACTTCGATGCTAGACATTTGGCTTGCCAATCAATTATTTAAGGCACTTCCAGAACATATTCAAGTC
ATCATGGTAGGCGACGAAGATCAGCTGCCATCAGTCGGACCGGGGCAGGTATTGAAAGATCTGCTGCAATCAGAGCGGAT
TCCGACTGTCCGTCTTACCGATATTTACCGGCAGGCAGAAGGATCATCAATCATTGAACTGGCACATGATATTAAAAAGG
GCTATCTGCCTGCAAATATTACCGCCAAACAGGCGGATCGTTCTTTTATCAAATGTTCCACGGCACAGGTGGCCCAAGTA
GTTGAAAAAGTAGCGCTTAATGCTAAAAATAAAGGGTATTCCGCAAAAGATATACAGGTGCTGGCGCCGATGTACAGAGG
GCCAGCAGGAATTGACCGCTTAAATGTGCTGCTCCAGGAAATTTTCAACCCAAACCCTGATGGGAAACGGAAGGAAATTA
CCTTTGGTGAGGCAAAATATCGGATCGGTGATAAGGTGCTACAGCTTGTGAATCAGCCGGAAAGCAATGTTTTTAACGGA
GATATAGGAGAAATAATTTCGATTATTTATGCGAAAGAAAACACAGAGAAACAGGATATGATTTACATTTCCTTTGAAGG
GAACGAGGTTGAATATACAAAGCAGGACTTGAATCAGATCACCCATGCTTACTGCTGTTCGGTCCATAAATCACAGGGCA
GTGAATTTCCGATTGTTATTCTCCCCATTACACGGAGCTATTATCGGATGCTGCGAAGAAATCTAATTTACACAGCCATT
ACCAGAAGTAAACAATCGTTGATTCTATGCGGTGAAGAGGATGCCCTTCGAATGGGAGTTGAAAGAGCAGATGAGCTCTC
GAGGCAAACGACGCTCTGCCAAAAACTTAAGGAATCGATTGCCGTAAAAGGGGACGATTCCCAAGAGGAGCAAACTGACA
TTGAAATGTCCTATGAGGAAGAATTAATGCATGTAAATCCAATGGTTGGGATGGAAAACGTTTCTCCTTATGATTTTATG
ATAAATGACTGA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix containing domain (HHH_RecD2) (158-249)

• AAA domain (AAA_30) (345-554)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (682-730)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (594-664)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	61.153	99.377	0.608