Detailed information NTG0036013

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: I33_RS13010
• Genome accession: NC_017195
• Coordinates: 2612582..2613847 (+)
• Length: 421 a.a.
• NCBI ID: WP_014477513.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis str. RO-NN-1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2607582..2618847

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I33_RS12990 (I33_2794)	yrrB	2608954..2609574 (-)	621	WP_202926392.1	tetratricopeptide repeat protein	-
I33_RS12995 (I33_2795)	mnmA	2609660..2610775 (-)	1116	WP_014477511.1	tRNA 2-thiouridine(34) synthase MnmA	-
I33_RS13000 (I33_2796)	iscSA	2610803..2611945 (-)	1143	WP_014477512.1	cysteine desulfurase family protein	-
I33_RS13005 (I33_2797)	cymR	2611964..2612380 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
I33_RS13010 (I33_2798)	rarA	2612582..2613847 (+)	1266	WP_014477513.1	replication-associated recombination protein A	Machinery gene
I33_RS13015 (I33_2799)	tcdA	2613887..2614651 (-)	765	WP_014477514.1	tRNA threonylcarbamoyladenosine dehydratase	-
I33_RS13020 (I33_2801)	aspS	2614986..2616764 (-)	1779	WP_014477516.1	aspartate--tRNA ligase	-
I33_RS13025 (I33_2802)	hisS	2616778..2618052 (-)	1275	WP_014477517.1	histidine--tRNA ligase	-
I33_RS20560 (I33_2803)	yrzK	2618435..2618605 (-)	171	WP_014477518.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46528.37 Da
• Isoelectric Point: 7.2043

>NTDB_id=36013 I33_RS13010 WP_014477513.1 2612582..2613847(+) (rarA) [Bacillus subtilis subsp. subtilis str. RO-NN-1]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDKLMRRK

Nucleotide

• Length: 1266 bp

>NTDB_id=36013 I33_RS13010 WP_014477513.1 2612582..2613847(+) (rarA) [Bacillus subtilis subsp. subtilis str. RO-NN-1]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGGATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTGGAACCGTTAACACCTGATCTGATTAAACAGGCACTGGAACGT
GCACTCCATGATGAACATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCATGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCGATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAAGATATCGGTTTAGCAAGCCCGCAAGCCG
GTCCGAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCTCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGGGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGGGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACAGGAAAATTCGAATCCGCCTTAAAGCAGGTGTACGATAAATTAATGAGAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.525	100	0.995