Detailed information NTG0359255

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: GSY53_RS00635
• Genome accession: NZ_CP047325
• Coordinates: 110960..112225 (+)
• Length: 421 a.a.
• NCBI ID: WP_019712521.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain GOT9
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 105960..117225

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GSY53_RS00615 (GSY53_00615)	yrrB	107332..107952 (-)	621	WP_237957762.1	tetratricopeptide repeat protein	-
GSY53_RS00620 (GSY53_00620)	mnmA	108038..109153 (-)	1116	WP_032677111.1	tRNA 2-thiouridine(34) synthase MnmA	-
GSY53_RS00625 (GSY53_00625)	iscSA	109181..110323 (-)	1143	WP_003229769.1	cysteine desulfurase family protein	-
GSY53_RS00630 (GSY53_00630)	cymR	110342..110758 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
GSY53_RS00635 (GSY53_00635)	rarA	110960..112225 (+)	1266	WP_019712521.1	replication-associated recombination protein A	Machinery gene
GSY53_RS00640 (GSY53_00640)	tcdA	112267..113031 (-)	765	WP_003229763.1	tRNA threonylcarbamoyladenosine dehydratase	-
GSY53_RS00650 (GSY53_00650)	aspS	113367..115145 (-)	1779	WP_003229758.1	aspartate--tRNA ligase	-
GSY53_RS00655 (GSY53_00655)	hisS	115159..116433 (-)	1275	WP_003229755.1	histidine--tRNA ligase	-
GSY53_RS00660 (GSY53_00660)	yrzK	116815..116985 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46493.38 Da
• Isoelectric Point: 7.1665

>NTDB_id=359255 GSY53_RS00635 WP_019712521.1 110960..112225(+) (rarA) [Bacillus subtilis strain GOT9]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVCIDDQAMEHFANGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=359255 GSY53_RS00635 WP_019712521.1 110960..112225(+) (rarA) [Bacillus subtilis strain GOT9]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTATGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGACTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGGATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGATCTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAACATCGGGGCCTTGGCACCTATTCTGTATGCATTGATGATCAGGCGATGGAGCATTTTGCCAACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCAATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAGGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGGGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACTGGAAAGTTCGAATCTGCCTTAAAGCAGGTGTACGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

• AAA C-terminal domain (AAA_assoc_2) (172-251)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.287	100	0.993