Detailed information
Bioinformatically predicted
Overview
| Name | comGE | Type | Machinery gene |
| Locus tag | E1949_RS07815 | Genome accession | NZ_CP039160 |
| Coordinates | 1560219..1560518 (-) | Length | 99 a.a. |
| NCBI ID | WP_000844413.1 | Uniprot ID | X5E258 |
| Organism | Staphylococcus aureus strain Lr6 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1555219..1565518
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E1949_RS07790 (E1949_07925) | gcvPA | 1556431..1557777 (-) | 1347 | WP_000019683.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
| E1949_RS07795 (E1949_07930) | gcvT | 1557797..1558888 (-) | 1092 | WP_000093346.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| E1949_RS07800 (E1949_07935) | - | 1559047..1559571 (-) | 525 | WP_001015121.1 | shikimate kinase | - |
| E1949_RS07805 (E1949_07940) | - | 1559561..1559707 (-) | 147 | WP_001789879.1 | hypothetical protein | - |
| E1949_RS07810 (E1949_07945) | comGF | 1559804..1560301 (-) | 498 | WP_001829055.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| E1949_RS07815 (E1949_07950) | comGE | 1560219..1560518 (-) | 300 | WP_000844413.1 | hypothetical protein | Machinery gene |
| E1949_RS07820 (E1949_07955) | comGD | 1560505..1560951 (-) | 447 | WP_001788899.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| E1949_RS07825 (E1949_07960) | comGC | 1560929..1561240 (-) | 312 | WP_000472256.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| E1949_RS07830 (E1949_07965) | comGB | 1561254..1562324 (-) | 1071 | WP_000776406.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| E1949_RS07835 (E1949_07970) | comGA | 1562296..1563270 (-) | 975 | WP_000697227.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| E1949_RS07840 (E1949_07975) | - | 1563322..1563945 (-) | 624 | WP_001223008.1 | MBL fold metallo-hydrolase | - |
| E1949_RS07845 (E1949_07980) | - | 1563942..1564271 (-) | 330 | WP_001018871.1 | MTH1187 family thiamine-binding protein | - |
| E1949_RS07850 (E1949_07985) | - | 1564271..1565257 (-) | 987 | WP_000161314.1 | ROK family glucokinase | - |
| E1949_RS07855 (E1949_07990) | - | 1565254..1565457 (-) | 204 | WP_000087561.1 | YqgQ family protein | - |
Sequence
Protein
Download Length: 99 a.a. Molecular weight: 11093.20 Da Isoelectric Point: 9.9215
>NTDB_id=357294 E1949_RS07815 WP_000844413.1 1560219..1560518(-) (comGE) [Staphylococcus aureus strain Lr6]
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
MKSYKCKGSFLIDSMAGFLLIGLITLLLIPMMNQMQASINHKLQTIDASKVILTTVSKINKEELKKGVTIGKYDIKQSDQ
QICAISKNTTSYQKTCIQY
Nucleotide
Download Length: 300 bp
>NTDB_id=357294 E1949_RS07815 WP_000844413.1 1560219..1560518(-) (comGE) [Staphylococcus aureus strain Lr6]
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
ATGAAAAGCTATAAGTGTAAAGGATCATTCTTAATAGATAGTATGGCTGGATTTTTGCTAATTGGATTGATTACATTACT
ATTGATACCAATGATGAATCAAATGCAAGCGAGTATAAACCATAAACTACAAACAATTGATGCTTCTAAAGTAATTTTGA
CGACTGTATCTAAAATTAATAAAGAAGAACTTAAGAAGGGGGTAACTATAGGGAAGTATGATATTAAGCAAAGTGACCAA
CAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTATTAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE | Staphylococcus aureus MW2 |
86.842 |
100 |
1 |
| comGE | Staphylococcus aureus N315 |
98.99 |
100 |
0.99 |