Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiE   Type   Regulator
Locus tag   GQ677_RS01375 Genome accession   NZ_CP047120
Coordinates   241229..241903 (+) Length   224 a.a.
NCBI ID   WP_002982458.1    Uniprot ID   A0ABU0A9I5
Organism   Streptococcus pyogenes strain 1085     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 236229..246903
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GQ677_RS01340 (GQ677_01340) - 236354..236659 (+) 306 WP_002993568.1 Spi family protease inhibitor -
  GQ677_RS01350 (GQ677_01350) prsA 237138..238067 (+) 930 WP_159330793.1 peptidylprolyl isomerase PrsA -
  GQ677_RS01355 (GQ677_01355) - 238344..238580 (-) 237 WP_136019711.1 hypothetical protein -
  GQ677_RS01360 (GQ677_01360) - 238825..239121 (+) 297 WP_136278364.1 DUF4298 domain-containing protein -
  GQ677_RS01365 (GQ677_01365) - 239267..239551 (+) 285 WP_002982442.1 hypothetical protein -
  GQ677_RS01370 (GQ677_01370) - 239974..241242 (+) 1269 WP_136273979.1 efflux RND transporter periplasmic adaptor subunit -
  GQ677_RS01375 (GQ677_01375) amiE 241229..241903 (+) 675 WP_002982458.1 ABC transporter ATP-binding protein Regulator
  GQ677_RS01380 (GQ677_01380) - 241979..243133 (+) 1155 WP_373560864.1 ABC transporter permease -
  GQ677_RS01385 (GQ677_01385) - 243227..243880 (+) 654 WP_002991237.1 response regulator transcription factor -
  GQ677_RS01390 (GQ677_01390) - 243877..245265 (+) 1389 WP_002982466.1 HAMP domain-containing sensor histidine kinase -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 24826.67 Da        Isoelectric Point: 5.7977

>NTDB_id=357281 GQ677_RS01375 WP_002982458.1 241229..241903(+) (amiE) [Streptococcus pyogenes strain 1085]
MLNLKDIRKSYHLGTEEFAILKGIDLEVNEGDFLAIMGPSGSGKSTLMNIIGCLDKPGSGSYAIEGRDVSSLSDNELADL
RNQKIGFVFQNFNLMPKLTACQNVELPLTYMNVPKKERRKRALEMLKLVGLEERSEFKPMELSGGQKQRVAIARALVTNP
SFILGDEPTGALDTKTSVQIMDLFKQFNDNGKTIIIITHEPEVAALCKKTVILRDGNIEHSDIE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=357281 GQ677_RS01375 WP_002982458.1 241229..241903(+) (amiE) [Streptococcus pyogenes strain 1085]
TTGTTAAACCTTAAAGATATTCGAAAAAGCTATCATCTTGGAACTGAAGAATTTGCGATTTTAAAAGGAATCGATTTAGA
AGTTAACGAGGGTGACTTTTTAGCCATCATGGGACCATCAGGTTCGGGAAAGTCAACATTGATGAATATCATTGGGTGTT
TAGATAAGCCTGGCTCTGGCTCATATGCCATTGAAGGCAGAGACGTGTCATCCTTATCTGATAATGAACTTGCTGATTTG
CGTAATCAAAAAATCGGCTTTGTTTTTCAAAATTTTAACCTGATGCCCAAGCTAACAGCTTGTCAAAATGTCGAATTACC
CTTGACTTATATGAATGTTCCTAAAAAAGAGCGTCGCAAACGAGCCCTAGAGATGTTAAAGCTAGTAGGACTAGAAGAAC
GTAGTGAATTTAAACCGATGGAGCTATCTGGTGGGCAAAAACAGCGTGTAGCGATTGCAAGAGCTTTAGTTACTAACCCG
AGTTTTATCCTTGGTGATGAGCCAACAGGTGCACTAGACACAAAAACCAGCGTCCAAATCATGGACCTATTTAAACAATT
CAATGATAACGGCAAAACGATTATTATCATCACACACGAGCCTGAAGTAGCTGCCCTATGCAAAAAGACGGTGATCCTAA
GAGATGGTAATATAGAACATTCCGATATAGAGTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(21-169)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

34.454

100

0.366