Detailed information NTG0357039

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: Psal114_RS19200
• Genome accession: NZ_CP039092
• Coordinates: 2940251..2941204 (+)
• Length: 317 a.a.
• NCBI ID: WP_069971666.1
• Uniprot ID: -
• Organism: Piscirickettsia salmonis strain Psal-114
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2935251..2946204

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Psal114_RS14845 (Psal114_02953)	-	2935631..2935987 (+)	357	WP_048875886.1	class I SAM-dependent methyltransferase	-
Psal114_RS14850 (Psal114_02954)	-	2935984..2937387 (-)	1404	WP_053856766.1	IS4 family transposase	-
Psal114_RS14855 (Psal114_02955)	-	2937507..2938067 (-)	561	WP_027243085.1	YbfB/YjiJ family MFS transporter	-
Psal114_RS14860 (Psal114_02956)	-	2938225..2938791 (-)	567	WP_017376236.1	hypothetical protein	-
Psal114_RS19200	pilA	2940251..2941204 (+)	954	WP_069971666.1	signal recognition particle-docking protein FtsY	Machinery gene
Psal114_RS14870 (Psal114_02958)	-	2941468..2942163 (-)	696	WP_027243087.1	hypothetical protein	-
Psal114_RS19205	-	2942204..2942338 (-)	135	Protein_2960	IS3 family transposase	-
Psal114_RS19210 (Psal114_02959)	-	2942621..2943448 (-)	828	WP_335645905.1	IS3 family transposase	-
Psal114_RS19215 (Psal114_02960)	-	2943361..2943648 (-)	288	WP_017376231.1	IS3 family transposase	-
Psal114_RS14885 (Psal114_02961)	-	2943714..2943881 (+)	168	WP_017376230.1	hypothetical protein	-
Psal114_RS14890 (Psal114_02962)	-	2943989..2945098 (+)	1110	WP_017376229.1	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 34301.26 Da
• Isoelectric Point: 6.3084

>NTDB_id=357039 Psal114_RS19200 WP_069971666.1 2940251..2941204(+) (pilA) [Piscirickettsia salmonis strain Psal-114]
MEKSNTNSNSEKKQGLFARLKSGLSKTRENLASGITTLLIGEKKIDDELLEDLETQLLMADVGIDATTHIITDLTKRLDR
NELTDTQKAMEALKENLSSMLTPCSVPLEIPKSPDPFVILVVGVNGAGKTTTIGKLAKHYQNQGKSVMLAAGDTFRAAAV
EQLQVWGERNDIPVVAQHTGADSASVIFDAYNSAKAHGCDILIADTAGRLHTQSNLMEELKKVKRVLGKVDNTAPHEVLL
VLDSGTGQNAINQAEQFHHAVNVSGIVMTKLDGTAKGGVIFAIAKKMQLPIRYIGVGEKIDDLRPFKSDEFIEALFG

Nucleotide

• Length: 954 bp

>NTDB_id=357039 Psal114_RS19200 WP_069971666.1 2940251..2941204(+) (pilA) [Piscirickettsia salmonis strain Psal-114]
ATTGAAAAAAGCAACACCAATAGTAATAGCGAGAAAAAGCAAGGCTTATTCGCCCGCTTAAAATCTGGTCTCAGTAAGAC
CCGTGAAAATCTGGCCTCAGGTATTACTACACTTTTAATCGGTGAGAAAAAAATCGATGATGAGCTGCTGGAAGATTTAG
AAACTCAGCTACTCATGGCAGACGTCGGCATTGATGCAACGACCCATATCATTACTGACCTAACCAAGCGTCTTGATCGC
AACGAACTTACAGATACCCAAAAAGCGATGGAAGCGCTCAAAGAAAACCTATCCAGCATGCTTACGCCTTGTAGTGTTCC
TCTAGAGATTCCCAAATCACCAGACCCCTTTGTTATTTTAGTCGTCGGCGTCAATGGTGCAGGTAAAACCACAACCATAG
GCAAACTTGCGAAACACTACCAGAACCAAGGCAAAAGCGTCATGCTCGCTGCAGGTGATACCTTCCGCGCTGCCGCGGTT
GAACAATTGCAAGTCTGGGGAGAGCGTAACGATATTCCGGTAGTTGCCCAGCATACCGGTGCTGATAGCGCATCAGTCAT
TTTCGATGCGTATAACTCAGCCAAAGCACATGGTTGTGATATTTTAATTGCCGATACCGCAGGCCGACTGCATACACAAA
GCAACTTAATGGAAGAGCTTAAAAAAGTAAAACGCGTGCTTGGCAAAGTCGACAATACAGCACCGCATGAAGTTTTATTA
GTTCTAGACTCAGGCACCGGGCAAAACGCTATTAACCAAGCTGAGCAGTTTCATCACGCTGTCAATGTATCAGGCATTGT
CATGACTAAACTCGATGGTACTGCTAAAGGTGGGGTCATTTTTGCCATTGCTAAAAAAATGCAACTACCGATCCGTTATA
TCGGTGTCGGTGAAAAAATCGATGATCTACGCCCTTTTAAATCAGATGAATTTATTGAGGCTTTGTTTGGCTAA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (33-97)

• SRP54-type protein, GTPase domain (SRP54) (116-316)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	53.074	97.476	0.517