Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   GPZ77_RS26100 Genome accession   NZ_CP046905
Coordinates   5714780..5715571 (-) Length   263 a.a.
NCBI ID   WP_158991227.1    Uniprot ID   A0ABW6YBJ3
Organism   Streptomyces sp. QHH-9511     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 5709780..5720571
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  - dinR/lexA 5714780..5715571 (-) 792 - - Regulator

Sequence

Protein


Download         Length: 263 a.a.        Molecular weight: 28395.14 Da        Isoelectric Point: 6.9852

>NTDB_id=356682 GPZ77_RS26100 WP_158991227.1 5714780..5715571(-) (dinR/lexA) [Streptomyces sp. QHH-9511]
MTTTADSATITAQDRSQGRLEPVHAMNDAVMNGDGEPGRPARSLPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRGYPP
SMREIGQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQPSTQPTDTSGKPAASYVPLVGRIAAGGPILAEE
SVEDVFPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKREDGHVWLLPHNA
AYQPIPGDEATILGKVVAVLRRV

Nucleotide


Download         Length: 792 bp        

>NTDB_id=356682 GPZ77_RS26100 WP_158991227.1 5714780..5715571(-) (dinR/lexA) [Streptomyces sp. QHH-9511]
GTGACCACCACCGCAGACAGTGCCACCATCACTGCCCAGGACCGCTCCCAGGGCCGACTCGAGCCGGTGCATGCCATGAA
CGACGCAGTCATGAACGGGGACGGCGAGCCAGGCCGGCCCGCGCGCTCCTTGCCCGGACGACCTCCAGGCATCAGGGCCG
ACAGCTCCGGCCTCACGGATCGCCAGCGGAGGGTCATCGAGGTCATCCGCGACTCGGTCCAGCGCCGCGGCTACCCGCCG
TCGATGCGTGAGATCGGTCAGGCGGTGGGCCTGTCCAGCACCTCCTCGGTCGCTCACCAGCTGATGGCCCTGGAGCGCAA
GGGCTTCCTCCGCCGCGACCCGCACCGGCCGCGTGCATACGAGGTGCGCGGCTCGGACCAGCCCAGCACCCAGCCGACGG
ACACCTCCGGCAAGCCCGCCGCCTCATACGTTCCGCTGGTCGGCCGGATCGCCGCCGGTGGCCCGATCCTCGCCGAGGAG
TCGGTCGAGGACGTCTTCCCGCTGCCTCGGCAGCTGGTCGGCGACGGCGAGCTGTTCGTGCTCAAGGTCGTCGGAGACTC
GATGATCGAGGCCGCCATCTGTGACGGCGACTGGGTGACCGTGCGCCGCCAGCCGGTCGCGGAGAACGGCGACATCGTGG
CGGCCATGCTCGACGGCGAGGCCACGGTCAAGCGCTTCAAGCGCGAGGACGGTCACGTCTGGCTGCTGCCGCACAACGCG
GCGTACCAGCCGATCCCCGGCGACGAGGCCACCATCCTCGGCAAGGTGGTCGCCGTACTGCGGCGAGTGTGA

Domains

Predicted by InterProScan.

Peptidase S24-like (Peptidase_S24)

(145-257)

LexA DNA binding domain (LexA_DNA_bind)

(56-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

46.226

80.608

0.373