Detailed information NTG0356009

Bioinformatically predicted

Overview

• Name: recD2
• Type: Machinery gene
• Locus tag: E5Z46_RS16610
• Genome accession: NZ_CP038860
• Coordinates: 3173053..3175413 (-)
• Length: 786 a.a.
• NCBI ID: WP_137088771.1
• Uniprot ID: -
• Organism: Geobacillus kaustophilus NBRC 102445
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3168053..3180413

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
E5Z46_RS16585 (E5Z46_16580)	alaS	3168066..3170702 (-)	2637	WP_014196399.1	alanine--tRNA ligase	-
E5Z46_RS16590 (E5Z46_16585)	-	3171021..3172082 (-)	1062	WP_021321998.1	AI-2E family transporter	-
E5Z46_RS16595 (E5Z46_16590)	-	3172201..3172335 (-)	135	WP_013144658.1	YrzQ family protein	-
E5Z46_RS16600 (E5Z46_16595)	-	3172347..3172538 (-)	192	WP_008881018.1	hypothetical protein	-
E5Z46_RS16605 (E5Z46_16600)	-	3172554..3173027 (-)	474	WP_042380620.1	PRC-barrel domain-containing protein	-
E5Z46_RS16610 (E5Z46_16605)	recD2	3173053..3175413 (-)	2361	WP_137088771.1	ATP-dependent RecD-like DNA helicase	Machinery gene
E5Z46_RS16615 (E5Z46_16610)	-	3175433..3176095 (-)	663	WP_011232039.1	tetratricopeptide repeat protein	-
E5Z46_RS16620 (E5Z46_16615)	mnmA	3176186..3177301 (-)	1116	WP_011232040.1	tRNA 2-thiouridine(34) synthase MnmA	-
E5Z46_RS16625 (E5Z46_16620)	-	3177316..3178458 (-)	1143	WP_011232041.1	cysteine desulfurase family protein	-
E5Z46_RS16630 (E5Z46_16625)	cymR	3178486..3178902 (-)	417	WP_011232042.1	cysteine metabolism transcriptional regulator CymR	-
E5Z46_RS16635 (E5Z46_16630)	-	3178922..3179146 (-)	225	WP_011232043.1	hypothetical protein	-

Sequence

Protein

• Length: 786 a.a.
• Molecular weight: 86579.25 Da
• Isoelectric Point: 5.0959

>NTDB_id=356009 E5Z46_RS16610 WP_137088771.1 3173053..3175413(-) (recD2) [Geobacillus kaustophilus NBRC 102445]
MREQQILALDGRTFIKGVCLAVIFHNEETLYTVVRVRVEETNEAPVEEEVVVTGYFPRLNEGDVYIFYGQFRQHPRFGRQ
YAASQFRKQLPNTKEGVIHYLSSGLFKGIGKKTAAAIVETLGENAIAAILRDPRALERVPKLTKKKAKQLYDALRAHEGL
EQTMIALAQLGFGPQLAMKIYQAYGEEAVDIIHENPYQLVEDIEGIGFGRADEIGRQLGISGSHPARLRAASLFVLEQAC
LQEGHVYLREEELMERIGELLDGRLSGAVDGRAISQTLLMLSEEGKLIAEQGRYYLPSLYFAEKGIVSNIKRLLGQTPPS
AFAESEFLLALGALEERLGMQYAPQQREAIQQALSSPLFILTGGPGTGKTTVIKGIVELFAALNGLSLDPADYKQGEPFP
VLLAAPTGRAAKRMSEATGLPAATIHRLLGWNGAEGFSRDENEPISGKLLVIDEMSMVDTWLANQLLKAVPNGMQVIFVG
DEDQLPSVGPGQVLKDLLSSGVIPFARLTEVYRQAEGSSIIELAHEMKRGVVPDDLTAPKADRSFIRCRAGQVVDVVRQI
ADNARKKGFSVKDIQVLAPMYRGPAGIDQLNKALQELFNPPAEGKRELSVGEVVYRVGDKVLQLVNQPEDNVFNGDIGEI
VAIFYAKENIEKQDLLVVSFDGIEVTYTRQDLGQITHAYCCSVHKAQGSEFPIVILPVVKSYYRMLKRNLLYTAVTRSKQ
FLVLCGEEEAFRFGVAKQSDGARQTALAEKLAGAAAPFVEVELPFEEANMGMENVTPYDFMGDEPS

Nucleotide

• Length: 2361 bp

>NTDB_id=356009 E5Z46_RS16610 WP_137088771.1 3173053..3175413(-) (recD2) [Geobacillus kaustophilus NBRC 102445]
TTGCGAGAGCAACAAATCCTCGCCCTTGACGGACGCACGTTCATTAAAGGAGTGTGCTTGGCGGTCATTTTTCATAATGA
GGAAACATTGTACACGGTCGTCCGCGTGCGCGTTGAGGAAACGAACGAAGCGCCCGTTGAGGAGGAAGTCGTCGTCACCG
GCTATTTTCCGCGTTTAAACGAAGGGGACGTCTACATCTTTTACGGACAATTCCGCCAACATCCGCGTTTTGGCCGCCAA
TATGCGGCTAGTCAGTTCCGCAAACAGCTTCCGAACACGAAAGAAGGAGTCATTCATTATTTATCGAGCGGTTTGTTTAA
AGGAATCGGCAAAAAAACGGCTGCGGCGATTGTCGAGACGCTCGGCGAAAACGCGATCGCCGCGATTTTGCGCGACCCCA
GGGCGCTAGAGCGTGTGCCGAAGCTGACGAAAAAAAAGGCGAAGCAGCTGTACGATGCGCTTCGCGCCCACGAAGGGCTT
GAGCAAACGATGATCGCCCTCGCCCAGCTCGGTTTTGGCCCGCAGCTGGCCATGAAAATTTACCAAGCGTATGGCGAAGA
AGCGGTTGACATCATCCACGAGAACCCGTACCAGCTCGTTGAGGATATCGAAGGGATCGGCTTTGGCCGCGCTGATGAAA
TCGGGCGCCAGCTCGGCATTTCCGGCAGCCATCCGGCCCGGCTGCGCGCCGCCTCGTTGTTTGTTCTTGAACAGGCGTGC
TTGCAGGAAGGGCACGTTTATTTGCGCGAGGAAGAGCTGATGGAGCGCATCGGGGAGCTGCTTGACGGAAGGCTGAGCGG
TGCGGTGGATGGACGAGCGATCAGCCAAACGCTTCTGATGTTAAGCGAAGAAGGGAAGCTGATCGCCGAGCAAGGGCGTT
ATTATCTCCCTTCCCTTTACTTCGCCGAGAAAGGGATCGTCTCCAACATTAAGCGGCTGCTCGGGCAGACGCCGCCGTCG
GCGTTTGCCGAGTCGGAGTTTTTGCTGGCGCTTGGGGCGCTTGAGGAACGGCTTGGCATGCAATATGCCCCCCAGCAAAG
GGAAGCGATCCAACAAGCGCTTTCTTCGCCGCTGTTTATTTTGACCGGCGGTCCGGGAACGGGGAAAACGACGGTCATCA
AAGGCATCGTCGAGCTGTTTGCCGCCCTAAACGGCCTGTCTCTTGACCCGGCTGACTACAAACAAGGCGAGCCGTTTCCG
GTGCTGCTGGCCGCACCGACCGGCCGAGCGGCGAAGCGGATGAGCGAGGCGACCGGGCTGCCGGCGGCGACGATCCACCG
CTTGCTTGGCTGGAATGGGGCGGAAGGGTTCAGCCGCGACGAGAACGAACCGATTTCCGGCAAGCTGCTTGTCATCGATG
AGATGTCGATGGTCGACACGTGGCTCGCCAACCAGCTGTTAAAAGCCGTGCCAAACGGCATGCAAGTCATTTTTGTCGGC
GATGAGGATCAATTGCCATCCGTCGGGCCAGGGCAAGTGCTGAAAGACTTGCTCTCTTCAGGCGTCATTCCGTTCGCTCG
GTTGACCGAGGTGTATCGCCAGGCGGAAGGATCATCGATCATCGAGCTTGCTCATGAGATGAAGCGCGGCGTCGTGCCGG
ACGATTTGACCGCTCCGAAGGCAGACCGTTCATTCATCCGCTGCCGTGCGGGCCAGGTCGTCGATGTCGTGCGGCAAATC
GCGGACAACGCGCGCAAAAAAGGGTTTTCCGTCAAAGATATTCAAGTGCTCGCCCCGATGTACCGTGGTCCAGCGGGCAT
TGACCAATTGAACAAAGCGCTTCAAGAGCTGTTCAACCCGCCGGCTGAGGGGAAGCGGGAGCTGTCGGTCGGTGAGGTCG
TCTACCGCGTCGGCGATAAGGTGCTGCAGCTCGTCAATCAACCGGAAGACAATGTGTTTAACGGCGACATCGGCGAAATC
GTTGCCATTTTTTACGCCAAAGAAAATATCGAAAAGCAAGACTTGCTCGTCGTCTCGTTTGATGGCATTGAAGTGACGTA
CACACGGCAAGATTTAGGACAAATCACCCATGCGTACTGCTGTTCGGTTCATAAGGCGCAAGGAAGCGAGTTTCCAATCG
TCATTTTGCCCGTCGTCAAAAGCTATTACCGGATGTTGAAACGGAATTTGTTGTATACTGCGGTGACAAGAAGCAAGCAG
TTTCTCGTTTTATGCGGGGAAGAGGAAGCGTTTCGATTCGGCGTCGCAAAACAAAGCGACGGAGCGCGCCAGACGGCGCT
CGCTGAGAAGCTGGCGGGGGCGGCGGCGCCGTTTGTCGAGGTCGAACTGCCGTTTGAAGAGGCGAACATGGGGATGGAAA
ACGTTACGCCGTATGACTTTATGGGCGATGAGCCAAGCTAA

Domains

Predicted by InterproScan.

• AAA domain (AAA_30) (341-548)

• Helix-hairpin-helix domain (HHH_5) (107-155)

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (590-660)

• Helix-hairpin-helix containing domain (HHH_RecD2) (157-247)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (677-725)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD2	Bacillus subtilis subsp. subtilis str. 168	59.975	100	0.604