Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | EQK04_RS00410 | Genome accession | NZ_CP038517 |
| Coordinates | 72207..74642 (+) | Length | 811 a.a. |
| NCBI ID | WP_007496263.1 | Uniprot ID | A0A5K1N9Z5 |
| Organism | Bacillus altitudinis strain SCU11 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 67207..79642
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EQK04_RS00395 (EQK04_00400) | - | 70078..70542 (+) | 465 | WP_003217184.1 | CtsR family transcriptional regulator | - |
| EQK04_RS00400 (EQK04_00405) | - | 70557..71114 (+) | 558 | WP_007496258.1 | UvrB/UvrC motif-containing protein | - |
| EQK04_RS00405 (EQK04_00410) | - | 71119..72210 (+) | 1092 | WP_017366451.1 | protein arginine kinase | - |
| EQK04_RS00410 (EQK04_00415) | clpC | 72207..74642 (+) | 2436 | WP_007496263.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| EQK04_RS00415 (EQK04_00420) | radA | 74736..76115 (+) | 1380 | WP_017359160.1 | DNA repair protein RadA | Machinery gene |
| EQK04_RS00420 (EQK04_00425) | disA | 76118..77197 (+) | 1080 | WP_007496267.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| EQK04_RS00425 (EQK04_00430) | - | 77351..78451 (+) | 1101 | WP_003217214.1 | PIN/TRAM domain-containing protein | - |
| EQK04_RS00430 (EQK04_00435) | ispD | 78465..79154 (+) | 690 | WP_008345432.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| EQK04_RS00435 (EQK04_00440) | ispF | 79158..79634 (+) | 477 | WP_007496273.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
Sequence
Protein
Download Length: 811 a.a. Molecular weight: 90025.76 Da Isoelectric Point: 6.2469
>NTDB_id=354971 EQK04_RS00410 WP_007496263.1 72207..74642(+) (clpC) [Bacillus altitudinis strain SCU11]
MMFGRFTERAQKVLALAQEEAIRLGHKNIGTEHILLGLVREGEGIAAKALEALGLVSDKIQKEVESLIGRGQEVSQAIPH
YTPRAKKVTELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGASAAGSNSNAN
TPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIIHNEVPEILRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIQVDQPSVDESIQILRGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAG
SKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREKVEVTKKSWKEKQGQENSEVSVDDIAMV
VSSWTGVPVSKIAQTETDKLLNMEQLLHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDESQNYKDMKGKVMGELKRAFRPEFINRIDEIIVFHSLEKKHL
KEIVSLMSDQLTKRLKEQDLSIELTEAAKAKIADEGVDLEYGARPLRRAIQKHVEDRLSEELLKGNIEKGQHIVLDVEDG
EIVVKATAATN
MMFGRFTERAQKVLALAQEEAIRLGHKNIGTEHILLGLVREGEGIAAKALEALGLVSDKIQKEVESLIGRGQEVSQAIPH
YTPRAKKVTELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGASAAGSNSNAN
TPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIIHNEVPEILRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIQVDQPSVDESIQILRGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAG
SKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREKVEVTKKSWKEKQGQENSEVSVDDIAMV
VSSWTGVPVSKIAQTETDKLLNMEQLLHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDESQNYKDMKGKVMGELKRAFRPEFINRIDEIIVFHSLEKKHL
KEIVSLMSDQLTKRLKEQDLSIELTEAAKAKIADEGVDLEYGARPLRRAIQKHVEDRLSEELLKGNIEKGQHIVLDVEDG
EIVVKATAATN
Nucleotide
Download Length: 2436 bp
>NTDB_id=354971 EQK04_RS00410 WP_007496263.1 72207..74642(+) (clpC) [Bacillus altitudinis strain SCU11]
ATGATGTTTGGAAGATTCACTGAAAGAGCTCAAAAGGTATTAGCACTTGCACAAGAAGAAGCCATTCGCCTAGGCCATAA
GAACATCGGAACAGAGCATATTTTACTTGGTCTTGTACGTGAAGGTGAGGGCATCGCCGCAAAAGCATTAGAAGCACTGG
GCCTTGTTTCAGATAAAATCCAAAAAGAAGTCGAGAGCTTGATTGGAAGAGGGCAAGAGGTGTCTCAAGCTATTCCTCAT
TACACACCTAGAGCGAAGAAGGTTACGGAGCTTTCTATGGATGAAGCGAGAAAGCTTGGTCATTCCTATGTAGGGACAGA
ACATATTCTTTTAGGTCTTATTCGTGAGGGAGAGGGTGTAGCTGCCCGTGTCTTAAATAACCTCGGAGTGAGCTTAAATA
AAGCACGCCAGCAAGTATTGCAGCTTCTAGGCAGCAATGAAACGGGTGCATCTGCGGCAGGATCTAATAGCAATGCCAAT
ACACCAACTTTAGATAGCTTGGCAAGAGACTTAACGGCTATTGCGAAAGAGGACAGCTTGGACCCTGTGATTGGCCGTAG
CAAAGAAATCCAGCGTGTCATTGAGGTATTAAGTAGAAGAACAAAGAATAACCCTGTGCTGATTGGAGAGCCTGGTGTTG
GTAAAACAGCGATCGCAGAAGGCCTCGCACAGCAAATTATTCACAACGAAGTGCCTGAGATTCTGCGTGATAAACGAGTC
ATGACACTTGATATGGGAACCGTTGTAGCGGGAACGAAATATCGTGGTGAATTCGAGGATCGTTTGAAAAAAGTCATGGA
CGAAATCCGTCAGGCTGGAAATATCATTCTCTTCATTGATGAACTTCATACACTGATTGGTGCAGGTGGAGCAGAGGGTG
CGATTGATGCCTCTAATATTCTAAAACCATCTTTAGCACGTGGTGAGCTTCAATGTATCGGGGCAACAACGTTAGATGAG
TACCGTAAATATATTGAAAAGGATGCAGCACTTGAACGTCGATTCCAGCCAATTCAAGTGGATCAGCCGTCTGTTGATGA
AAGTATTCAAATTTTAAGAGGGCTTAGAGACCGTTATGAAGCACATCACCGTGTGTCTATTACAGATGAAGCCATTGAGG
CGGCGGTAAAGCTTTCTGATCGTTATATCTCTGATCGTTTCCTTCCAGATAAGGCGATCGACTTAATTGATGAGGCGGGT
TCAAAAGTTCGTTTACGTTCTTTCACAACACCGCCTAACCTAAAGGAACTTGAGCAAAAGCTGGATGAAGTACGCAAGGA
AAAGGATGCAGCTGTTCAAAGTCAAGAATTTGAAAAAGCCGCTTCTCTTCGTGATACGGAGCAACGTTTGCGCGAAAAGG
TAGAAGTGACGAAGAAATCTTGGAAAGAAAAGCAGGGACAAGAGAATTCAGAGGTTTCTGTTGATGATATCGCAATGGTT
GTTTCTAGCTGGACGGGTGTACCTGTTTCGAAAATTGCTCAAACAGAAACAGATAAGCTCCTGAACATGGAACAATTGCT
CCACTCTCGCGTCATTGGACAGGATGAAGCAGTTGTTGCTGTTGCAAAAGCTGTAAGACGTGCCCGTGCTGGACTAAAAG
ATCCGAAACGTCCGATTGGCTCCTTTATTTTCTTAGGACCAACAGGTGTTGGTAAGACTGAGCTTGCAAGAGCACTCGCT
GAGTCTATCTTCGGTGATGAAGAAGCGATGATTCGTATTGATATGTCCGAGTACATGGAAAAACACTCGACTTCAAGACT
TGTTGGATCACCTCCAGGCTATGTGGGTTATGATGAGGGCGGTCAGCTGACTGAAAAAGTGAGAAGAAAGCCGTATTCTG
TCGTGCTTCTAGATGAGATTGAAAAGGCGCACCCTGATGTGTTTAACATCTTACTTCAAGTGTTAGAAGATGGTCGTCTC
ACTGATTCTAAAGGTCGTACTGTTGACTTTAGAAATACGATCTTGATTATGACTTCAAACGTTGGAGCTAGTGAGCTGAA
GCGCAATAAATATGTTGGCTTTAACGTGCAGGATGAAAGTCAAAATTACAAAGATATGAAAGGCAAAGTAATGGGTGAGT
TGAAACGTGCGTTTAGACCGGAGTTCATCAACCGTATTGATGAAATCATTGTCTTCCACTCACTCGAAAAGAAACATCTA
AAAGAGATTGTGTCTCTCATGTCTGATCAATTGACAAAACGACTAAAAGAGCAGGACCTTTCAATTGAATTGACGGAAGC
AGCAAAAGCCAAGATTGCCGACGAAGGCGTAGATCTTGAGTATGGTGCTCGTCCGTTAAGAAGAGCGATTCAAAAGCACG
TCGAGGATCGACTTTCTGAGGAATTGCTGAAAGGCAATATTGAAAAGGGCCAACATATCGTATTAGATGTAGAAGATGGA
GAAATTGTCGTAAAAGCAACGGCTGCTACGAACTAA
ATGATGTTTGGAAGATTCACTGAAAGAGCTCAAAAGGTATTAGCACTTGCACAAGAAGAAGCCATTCGCCTAGGCCATAA
GAACATCGGAACAGAGCATATTTTACTTGGTCTTGTACGTGAAGGTGAGGGCATCGCCGCAAAAGCATTAGAAGCACTGG
GCCTTGTTTCAGATAAAATCCAAAAAGAAGTCGAGAGCTTGATTGGAAGAGGGCAAGAGGTGTCTCAAGCTATTCCTCAT
TACACACCTAGAGCGAAGAAGGTTACGGAGCTTTCTATGGATGAAGCGAGAAAGCTTGGTCATTCCTATGTAGGGACAGA
ACATATTCTTTTAGGTCTTATTCGTGAGGGAGAGGGTGTAGCTGCCCGTGTCTTAAATAACCTCGGAGTGAGCTTAAATA
AAGCACGCCAGCAAGTATTGCAGCTTCTAGGCAGCAATGAAACGGGTGCATCTGCGGCAGGATCTAATAGCAATGCCAAT
ACACCAACTTTAGATAGCTTGGCAAGAGACTTAACGGCTATTGCGAAAGAGGACAGCTTGGACCCTGTGATTGGCCGTAG
CAAAGAAATCCAGCGTGTCATTGAGGTATTAAGTAGAAGAACAAAGAATAACCCTGTGCTGATTGGAGAGCCTGGTGTTG
GTAAAACAGCGATCGCAGAAGGCCTCGCACAGCAAATTATTCACAACGAAGTGCCTGAGATTCTGCGTGATAAACGAGTC
ATGACACTTGATATGGGAACCGTTGTAGCGGGAACGAAATATCGTGGTGAATTCGAGGATCGTTTGAAAAAAGTCATGGA
CGAAATCCGTCAGGCTGGAAATATCATTCTCTTCATTGATGAACTTCATACACTGATTGGTGCAGGTGGAGCAGAGGGTG
CGATTGATGCCTCTAATATTCTAAAACCATCTTTAGCACGTGGTGAGCTTCAATGTATCGGGGCAACAACGTTAGATGAG
TACCGTAAATATATTGAAAAGGATGCAGCACTTGAACGTCGATTCCAGCCAATTCAAGTGGATCAGCCGTCTGTTGATGA
AAGTATTCAAATTTTAAGAGGGCTTAGAGACCGTTATGAAGCACATCACCGTGTGTCTATTACAGATGAAGCCATTGAGG
CGGCGGTAAAGCTTTCTGATCGTTATATCTCTGATCGTTTCCTTCCAGATAAGGCGATCGACTTAATTGATGAGGCGGGT
TCAAAAGTTCGTTTACGTTCTTTCACAACACCGCCTAACCTAAAGGAACTTGAGCAAAAGCTGGATGAAGTACGCAAGGA
AAAGGATGCAGCTGTTCAAAGTCAAGAATTTGAAAAAGCCGCTTCTCTTCGTGATACGGAGCAACGTTTGCGCGAAAAGG
TAGAAGTGACGAAGAAATCTTGGAAAGAAAAGCAGGGACAAGAGAATTCAGAGGTTTCTGTTGATGATATCGCAATGGTT
GTTTCTAGCTGGACGGGTGTACCTGTTTCGAAAATTGCTCAAACAGAAACAGATAAGCTCCTGAACATGGAACAATTGCT
CCACTCTCGCGTCATTGGACAGGATGAAGCAGTTGTTGCTGTTGCAAAAGCTGTAAGACGTGCCCGTGCTGGACTAAAAG
ATCCGAAACGTCCGATTGGCTCCTTTATTTTCTTAGGACCAACAGGTGTTGGTAAGACTGAGCTTGCAAGAGCACTCGCT
GAGTCTATCTTCGGTGATGAAGAAGCGATGATTCGTATTGATATGTCCGAGTACATGGAAAAACACTCGACTTCAAGACT
TGTTGGATCACCTCCAGGCTATGTGGGTTATGATGAGGGCGGTCAGCTGACTGAAAAAGTGAGAAGAAAGCCGTATTCTG
TCGTGCTTCTAGATGAGATTGAAAAGGCGCACCCTGATGTGTTTAACATCTTACTTCAAGTGTTAGAAGATGGTCGTCTC
ACTGATTCTAAAGGTCGTACTGTTGACTTTAGAAATACGATCTTGATTATGACTTCAAACGTTGGAGCTAGTGAGCTGAA
GCGCAATAAATATGTTGGCTTTAACGTGCAGGATGAAAGTCAAAATTACAAAGATATGAAAGGCAAAGTAATGGGTGAGT
TGAAACGTGCGTTTAGACCGGAGTTCATCAACCGTATTGATGAAATCATTGTCTTCCACTCACTCGAAAAGAAACATCTA
AAAGAGATTGTGTCTCTCATGTCTGATCAATTGACAAAACGACTAAAAGAGCAGGACCTTTCAATTGAATTGACGGAAGC
AGCAAAAGCCAAGATTGCCGACGAAGGCGTAGATCTTGAGTATGGTGCTCGTCCGTTAAGAAGAGCGATTCAAAAGCACG
TCGAGGATCGACTTTCTGAGGAATTGCTGAAAGGCAATATTGAAAAGGGCCAACATATCGTATTAGATGTAGAAGATGGA
GAAATTGTCGTAAAAGCAACGGCTGCTACGAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
96.054 |
100 |
0.961 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
49.383 |
99.877 |
0.493 |
| clpC | Streptococcus thermophilus LMD-9 |
46.489 |
100 |
0.473 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.126 |
100 |
0.47 |
| clpC | Streptococcus pneumoniae Rx1 |
45.679 |
99.877 |
0.456 |
| clpC | Streptococcus pneumoniae D39 |
45.679 |
99.877 |
0.456 |
| clpC | Streptococcus pneumoniae TIGR4 |
45.679 |
99.877 |
0.456 |
| clpC | Streptococcus mutans UA159 |
43.675 |
100 |
0.451 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
49.088 |
87.916 |
0.432 |
| clpE | Streptococcus mutans UA159 |
53.323 |
79.778 |
0.425 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.713 |
79.531 |
0.419 |
| clpE | Streptococcus pneumoniae Rx1 |
52.713 |
79.531 |
0.419 |
| clpE | Streptococcus pneumoniae D39 |
52.713 |
79.531 |
0.419 |
| clpE | Streptococcus pneumoniae R6 |
52.713 |
79.531 |
0.419 |