Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   GO596_RS08855 Genome accession   NZ_CP046628
Coordinates   1783812..1785689 (-) Length   625 a.a.
NCBI ID   WP_157339641.1    Uniprot ID   -
Organism   Streptococcus equinus strain CNU 77-23     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1778812..1790689
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GO596_RS09555 - 1779769..1780017 (-) 249 Protein_1673 biotin/lipoyl-containing protein -
  GO596_RS08835 (GO596_08835) - 1780045..1781073 (-) 1029 Protein_1674 dihydrolipoamide acetyltransferase -
  GO596_RS08840 (GO596_08840) - 1781127..1782131 (-) 1005 WP_157339639.1 alpha-ketoacid dehydrogenase subunit beta -
  GO596_RS08845 (GO596_08845) - 1782163..1783128 (-) 966 WP_413083586.1 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha -
  GO596_RS08850 (GO596_08850) - 1783266..1783682 (-) 417 WP_157339640.1 cupin domain-containing protein -
  GO596_RS08855 (GO596_08855) rcrQ 1783812..1785689 (-) 1878 WP_157339641.1 ABC transporter ATP-binding protein Regulator
  GO596_RS08860 (GO596_08860) - 1785689..1787440 (-) 1752 WP_157339642.1 ABC transporter ATP-binding protein -
  GO596_RS08865 (GO596_08865) - 1787433..1787879 (-) 447 WP_021142069.1 MarR family winged helix-turn-helix transcriptional regulator -
  GO596_RS08870 (GO596_08870) - 1788070..1789989 (-) 1920 WP_074533908.1 ABC-F family ATP-binding cassette domain-containing protein -

Sequence

Protein


Download         Length: 625 a.a.        Molecular weight: 69903.40 Da        Isoelectric Point: 6.7504

>NTDB_id=354027 GO596_RS08855 WP_157339641.1 1783812..1785689(-) (rcrQ) [Streptococcus equinus strain CNU 77-23]
MSQSKTQVNKQATLKRVLAYILKNYKWRFMAVFVLILISALCMVRFSLFMQTLIDSYITPLLAAKNPDFSGLAHAIFQLI
IIGIIGVASTYTFNRLMVYVGQGTMRRIRVDLFTHMESLPIKYFDTHAHGDIMSIYTNDVDTLRQLISQSIPQVVNSTFS
IVTTFVSMLVLNVPLSVLSLFMVVILLYVARKIAAQSSRYFHDQQNDLGRVNGFIEEMMDGQKVVKVFNHEERAKEDFRK
LNQELRESATNANIFANILMPVSANIGHFSYVLCAMLGAVLALNGYAGLTLGTLVSFLALNRGFTNPITQISQQINSVVM
AMAGADRVFQLLDAEPELDEGYVELVNAKEDAAGNLQEVEESTGTWAWKHPHEDGTVTYHKQEGRVTFTDVTFGYNDDKM
VLHDINLFAEPGQKIAFVGSTGAGKTTITNLINRFYDIQEGKIHYDGINIRKIKKLDLRRSLGIVLQDTHLFTGTVMDNI
RYGRLNATDEECIEAAKLANAHDFIKRLPEGYDTILTGDGSNLSQGQRQLLAIARAAVANPPALILDEATSSIDTRTEVH
VQEGMDALMKGRTTFVIAHRLSTVRNADCIMVLEQGRIIERGNHDELIAQKGRYYQLYTGNAISE

Nucleotide


Download         Length: 1878 bp        

>NTDB_id=354027 GO596_RS08855 WP_157339641.1 1783812..1785689(-) (rcrQ) [Streptococcus equinus strain CNU 77-23]
ATGTCTCAATCTAAAACTCAAGTGAATAAACAGGCAACGCTAAAACGTGTTTTGGCTTATATTTTAAAAAACTATAAATG
GCGATTTATGGCAGTGTTTGTTTTGATTTTAATCTCTGCCCTTTGTATGGTTCGTTTTAGTTTGTTTATGCAAACCTTGA
TTGATAGTTATATTACTCCTCTTTTAGCAGCTAAGAATCCTGATTTTTCAGGATTGGCACACGCTATTTTCCAATTGATT
ATTATTGGGATTATCGGGGTAGCAAGTACTTATACTTTTAACCGTCTTATGGTTTATGTTGGGCAAGGAACAATGCGACG
CATTCGTGTTGATTTGTTCACACACATGGAAAGCTTGCCAATTAAGTACTTTGATACACATGCTCACGGTGATATCATGT
CAATCTACACTAACGACGTTGATACTCTTCGTCAGTTGATTAGTCAAAGTATTCCGCAAGTGGTTAATTCAACTTTTTCT
ATCGTGACAACATTTGTCAGCATGCTTGTTTTGAACGTGCCGTTGTCAGTTTTGTCACTATTTATGGTTGTTATTCTACT
TTACGTGGCTCGTAAAATCGCTGCACAATCATCAAGATATTTCCATGACCAACAAAATGATCTCGGTCGTGTCAATGGGT
TCATTGAGGAAATGATGGATGGTCAGAAAGTCGTTAAAGTTTTCAACCACGAAGAGCGTGCTAAGGAAGATTTCCGAAAA
CTTAACCAAGAACTTCGTGAATCTGCTACAAATGCCAACATCTTTGCGAATATCTTGATGCCAGTTTCTGCTAATATCGG
TCACTTTTCATATGTTCTTTGTGCCATGCTTGGAGCAGTTCTTGCTCTTAATGGCTATGCTGGCTTGACTTTGGGGACTT
TGGTTTCTTTCCTAGCATTAAACCGTGGTTTTACTAATCCGATTACTCAAATCAGTCAACAAATCAACTCTGTTGTTATG
GCGATGGCAGGTGCTGACCGTGTCTTCCAACTGCTAGATGCAGAACCTGAATTGGATGAAGGTTACGTTGAATTGGTTAA
TGCAAAAGAAGATGCTGCTGGAAATCTGCAAGAAGTGGAAGAATCAACTGGTACTTGGGCTTGGAAACATCCACACGAAG
ATGGTACAGTGACTTATCATAAACAAGAAGGTCGTGTAACTTTCACAGATGTAACTTTTGGTTATAACGATGATAAGATG
GTTTTACATGACATTAATTTGTTTGCGGAACCTGGTCAAAAAATCGCTTTTGTAGGCTCAACTGGTGCGGGTAAAACAAC
CATTACAAACTTGATTAACCGTTTCTACGACATCCAAGAAGGTAAGATTCATTACGATGGTATTAACATTCGTAAAATCA
AAAAACTTGACCTTCGTCGTAGTTTAGGTATTGTATTGCAAGATACTCACCTCTTTACAGGAACGGTTATGGATAACATC
CGCTACGGACGTTTGAATGCGACTGATGAAGAGTGTATTGAAGCAGCTAAATTAGCTAATGCACATGATTTCATTAAACG
TTTGCCAGAAGGTTATGATACCATTTTGACAGGTGACGGAAGTAATCTTTCTCAAGGACAACGTCAATTGCTTGCGATTG
CGCGTGCAGCAGTGGCAAATCCACCTGCTTTGATTTTGGATGAAGCAACGTCATCAATCGATACGCGTACTGAAGTCCAC
GTGCAAGAAGGTATGGATGCTCTTATGAAAGGTCGTACAACATTTGTTATCGCTCACCGCTTGTCAACTGTTCGTAATGC
TGATTGTATCATGGTTCTTGAACAAGGACGCATTATCGAACGTGGTAACCACGACGAGTTGATTGCGCAAAAAGGACGTT
ATTACCAACTTTACACAGGTAATGCCATTAGTGAATAA

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(30-307)

ABC transporter (ABC_tran)

(402-551)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

38.898

98.72

0.384