Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   GO596_RS08175 Genome accession   NZ_CP046628
Coordinates   1646143..1647879 (-) Length   578 a.a.
NCBI ID   WP_141348437.1    Uniprot ID   -
Organism   Streptococcus equinus strain CNU 77-23     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 1641143..1652879
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GO596_RS08155 (GO596_08155) - 1641495..1641806 (-) 312 WP_157339573.1 hypothetical protein -
  GO596_RS08160 (GO596_08160) guaA 1642037..1643599 (-) 1563 WP_157339574.1 glutamine-hydrolyzing GMP synthase -
  GO596_RS08165 (GO596_08165) - 1644031..1644501 (+) 471 WP_232516856.1 TVP38/TMEM64 family protein -
  GO596_RS08170 (GO596_08170) - 1644613..1646070 (+) 1458 WP_157339575.1 alpha-amylase -
  GO596_RS08175 (GO596_08175) rcrQ 1646143..1647879 (-) 1737 WP_141348437.1 ABC transporter ATP-binding protein Regulator
  GO596_RS08180 (GO596_08180) - 1647883..1649604 (-) 1722 WP_157339576.1 ABC transporter ATP-binding protein -
  GO596_RS08185 (GO596_08185) - 1649629..1650231 (-) 603 WP_074639139.1 lysozyme family protein -
  GO596_RS08190 (GO596_08190) - 1650231..1651208 (-) 978 WP_126437810.1 nucleoid-associated protein -
  GO596_RS08195 (GO596_08195) glyA 1651251..1652501 (-) 1251 WP_157339577.1 serine hydroxymethyltransferase -

Sequence

Protein


Download         Length: 578 a.a.        Molecular weight: 64067.18 Da        Isoelectric Point: 5.5252

>NTDB_id=354023 GO596_RS08175 WP_141348437.1 1646143..1647879(-) (rcrQ) [Streptococcus equinus strain CNU 77-23]
MKARNQSTTTRRLFKDLFSQKGLVIGATLGTIAQVALTVYLPVLIGNAVDVVLSPKSLTLILPIIVKMLVVVALNTLIQW
LNPLIYNRLTFGYIYDLRQRVMEKLNQMPIAYLDKKSSGDLVSRVTTDAEQLSNGLLMVFNQFFIGVLTIIITIVTMADI
DLLMLGLVLVLTPLSLFLARFIANKSYHLYQKQTKSRGRQTQYIEEMIRQESLLHVFNAQDAAIDTFTEINDTYADYSQG
AIFYSSTVNPSTRFINSLIYALLAGVGALRIMSGAFTVGQLTTFLNYVNQYTKPFNDISSVLSELQGAIACADRLYAILD
EENEPLPVTAELDEDKIQGQIEFKDVSFGYTPQKTLINHLSLSIPAASKVAIVGPTGAGKSTLINLLMRFYEVNSGAIYL
DGVSMADYSVEELRKQIGMVLQETWLKVGTIHDNIAYGNPQATREEVIQAAKAANADFFIRQLPNGYDTYLADAGASLSQ
GQRQLLTIARIFVKLPKILILDEATSSIDTRTEVLVQEAFEKLMQGRTSFIIAHRLSTIQSADCILVMVDGDIVEYGTHA
ELMAKQGVYYQMQTAQAG

Nucleotide


Download         Length: 1737 bp        

>NTDB_id=354023 GO596_RS08175 WP_141348437.1 1646143..1647879(-) (rcrQ) [Streptococcus equinus strain CNU 77-23]
ATGAAAGCAAGAAATCAATCAACTACAACTCGTCGCTTGTTTAAAGACCTCTTTTCTCAAAAAGGACTTGTCATTGGAGC
AACGCTTGGTACAATAGCCCAAGTCGCATTGACTGTTTACCTTCCTGTTTTGATTGGTAACGCAGTCGATGTCGTTCTTT
CTCCAAAATCACTGACTTTGATTTTACCAATCATCGTGAAAATGCTTGTCGTTGTCGCACTGAATACTTTAATCCAATGG
CTTAATCCATTGATTTATAATCGTTTAACCTTTGGTTATATTTACGATTTGCGTCAAAGGGTAATGGAAAAATTAAATCA
AATGCCGATTGCTTATCTTGATAAGAAAAGTTCTGGAGATTTGGTTAGTCGTGTAACGACTGATGCAGAGCAATTAAGTA
ATGGTCTTTTGATGGTCTTTAATCAGTTTTTCATTGGTGTTTTGACCATTATCATTACCATTGTTACGATGGCTGATATT
GATCTTCTGATGCTTGGTTTGGTATTGGTTTTAACGCCACTTTCTCTTTTCTTGGCACGATTTATTGCTAATAAGAGTTA
TCACCTTTACCAAAAGCAAACCAAATCTCGTGGTCGTCAGACACAATATATCGAAGAGATGATTCGTCAAGAAAGTTTGC
TACATGTTTTTAACGCACAAGATGCTGCCATTGATACCTTTACTGAAATCAATGATACCTACGCAGATTATTCACAAGGT
GCAATTTTCTACTCATCAACCGTCAATCCTTCAACGCGTTTTATCAATAGCTTGATTTATGCGTTGCTTGCAGGAGTGGG
AGCGTTGCGCATCATGTCAGGTGCCTTTACAGTTGGTCAGTTAACAACATTTTTGAATTATGTTAACCAATATACCAAAC
CTTTCAATGATATTTCATCAGTCTTGTCAGAATTGCAAGGAGCCATCGCTTGTGCAGATCGCCTTTATGCCATCTTGGAT
GAAGAAAACGAGCCTCTTCCAGTGACTGCGGAACTTGATGAGGACAAGATTCAAGGACAAATTGAATTTAAAGACGTGTC
ATTTGGTTACACTCCTCAGAAAACGTTGATTAATCACTTGAGTTTATCTATTCCAGCAGCTTCAAAAGTGGCTATTGTAG
GTCCGACAGGAGCAGGAAAATCAACGTTGATTAATCTCTTGATGCGTTTTTATGAAGTAAATAGTGGAGCTATTTATTTG
GATGGTGTATCAATGGCTGATTATTCTGTTGAGGAACTTCGCAAGCAAATTGGTATGGTTCTGCAAGAGACTTGGCTAAA
AGTTGGAACAATCCATGATAATATTGCTTATGGTAATCCTCAAGCAACACGAGAAGAAGTTATCCAAGCAGCAAAAGCAG
CTAACGCAGATTTCTTCATCCGTCAATTACCAAATGGCTATGACACATATTTGGCTGATGCTGGAGCTTCACTGTCTCAA
GGACAACGTCAGCTTTTGACGATTGCACGTATTTTTGTGAAATTACCAAAAATCTTGATACTTGATGAAGCAACGTCATC
TATTGATACGCGTACAGAAGTGCTAGTTCAAGAAGCCTTCGAAAAATTGATGCAAGGCCGTACAAGCTTTATCATTGCTC
ACCGTTTATCAACCATCCAATCAGCTGACTGTATTTTAGTCATGGTTGATGGAGATATTGTTGAATATGGCACACACGCA
GAATTAATGGCAAAACAAGGTGTCTACTATCAAATGCAAACAGCACAAGCTGGATGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(358-506)

ABC transporter transmembrane region (ABC_membrane)

(25-294)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

37.993

96.54

0.367

Multiple sequence alignment