Detailed information NTG0353779

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: GO005_RS14055
• Genome accession: NZ_CP046592
• Coordinates: 2705609..2706874 (+)
• Length: 421 a.a.
• NCBI ID: WP_015714437.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain TR21
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2700609..2711874

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GO005_RS14035 (GO005_14010)	yrrB	2701980..2702600 (-)	621	WP_202926392.1	tetratricopeptide repeat protein	-
GO005_RS14040 (GO005_14015)	mnmA	2702686..2703801 (-)	1116	WP_004398509.1	tRNA 2-thiouridine(34) synthase MnmA	-
GO005_RS14045 (GO005_14020)	iscSA	2703832..2704971 (-)	1140	WP_032722251.1	cysteine desulfurase family protein	-
GO005_RS14050 (GO005_14025)	cymR	2704990..2705406 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
GO005_RS14055 (GO005_14030)	rarA	2705609..2706874 (+)	1266	WP_015714437.1	replication-associated recombination protein A	Machinery gene
GO005_RS14060 (GO005_14035)	tcdA	2706916..2707680 (-)	765	WP_032722252.1	tRNA threonylcarbamoyladenosine dehydratase	-
GO005_RS14070 (GO005_14045)	aspS	2708016..2709794 (-)	1779	WP_032722253.1	aspartate--tRNA ligase	-
GO005_RS14075 (GO005_14050)	hisS	2709808..2711082 (-)	1275	WP_032722254.1	histidine--tRNA ligase	-
GO005_RS14080 (GO005_14055)	yrzK	2711464..2711634 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46500.35 Da
• Isoelectric Point: 7.2043

>NTDB_id=353779 GO005_RS14055 WP_015714437.1 2705609..2706874(+) (rarA) [Bacillus subtilis strain TR21]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=353779 GO005_RS14055 WP_015714437.1 2705609..2706874(+) (rarA) [Bacillus subtilis strain TR21]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGAATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGATCTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCGATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAAGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGGGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACTGGAAAGTTCGAATCTGCCTTAAAGCAGGTGTACGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.762	100	0.998