Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   GOM47_RS03605 Genome accession   NZ_CP046524
Coordinates   696873..698621 (+) Length   582 a.a.
NCBI ID   WP_235081118.1    Uniprot ID   -
Organism   Streptococcus oralis strain SOT     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 691873..703621
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GOM47_RS03590 (GOM47_03580) thrB 693029..693898 (+) 870 WP_235081115.1 homoserine kinase -
  GOM47_RS03595 (GOM47_03585) msrB 694150..695088 (+) 939 WP_235081116.1 peptide-methionine (R)-S-oxide reductase MsrB -
  GOM47_RS03600 (GOM47_03590) - 695147..696871 (+) 1725 WP_235081117.1 ABC transporter ATP-binding protein -
  GOM47_RS03605 (GOM47_03595) rcrQ 696873..698621 (+) 1749 WP_235081118.1 ABC transporter ATP-binding protein Regulator
  GOM47_RS03610 (GOM47_03600) - 698723..699982 (+) 1260 WP_235081119.1 TRZ/ATZ family protein -
  GOM47_RS03615 (GOM47_03605) rplJ 700218..700718 (+) 501 WP_070567620.1 50S ribosomal protein L10 -
  GOM47_RS03620 (GOM47_03610) rplL 700793..701158 (+) 366 WP_235081120.1 50S ribosomal protein L7/L12 -
  GOM47_RS03625 (GOM47_03615) - 701360..701533 (+) 174 WP_000159607.1 hypothetical protein -
  GOM47_RS03630 (GOM47_03620) - 701530..702309 (+) 780 WP_000822762.1 replication initiator protein A -

Sequence

Protein


Download         Length: 582 a.a.        Molecular weight: 64787.32 Da        Isoelectric Point: 8.5590

>NTDB_id=352797 GOM47_RS03605 WP_235081118.1 696873..698621(+) (rcrQ) [Streptococcus oralis strain SOT]
MRRQTANQTLKRLAKDLASHPFLLFLAFLGTIAQVALSIYLPILIGQVIDQVLVAGSSPVFWQIFLQMILVVIGNTLVQW
ANPLLYNRLIFSYTRDLRERIIHKLHRLPIAFVDRQGSGEMVSRVTTDIEQLAAGLTMIFNQFFIGVLMILVSILAMLQI
HLLMTLLVLLLTPLSMVISRFIAKKSYHLFQKQTETRGIQTQLIEESLSQQTIIQTFNAQTEFIQRLHEANANYAGYSQS
AIFYSSTVNPSTRFVNALIYALLAGVGAYRIMMGSTLTIGRLVTFLNYVQQYTKPFNDISSVLAELQSALACAERVYAVL
ESSEVSETGKEVLTSDQVKGAISFKHVTFGYHPEKILIKDLSIDIPAGSKVAIVGPTGAGKSTLINLLMRFYPINSGDIL
LDGHSIYDYTRASLRQQFGMVLQETWLKQGTIHDNIAFGNPEASREQVIAAAKAANADFFIQQLPQGYDTKLENAGESLS
VGQAQLLTIARVFLAIPKILILDEATSSIDTRTEVLVQDAFAKLMKGRTSFIIAHRLSTIQDADLILVLVDGDIVEHGNH
QDLMARKGKYYQMQRAAVFSSE

Nucleotide


Download         Length: 1749 bp        

>NTDB_id=352797 GOM47_RS03605 WP_235081118.1 696873..698621(+) (rcrQ) [Streptococcus oralis strain SOT]
ATGAGACGACAAACCGCAAACCAGACGCTCAAACGTTTGGCTAAGGATTTAGCAAGCCATCCCTTCCTCCTTTTCCTAGC
CTTTCTAGGAACTATTGCCCAGGTTGCCTTATCAATCTACCTACCTATTCTGATTGGGCAGGTCATTGACCAGGTCCTGG
TGGCTGGTTCTTCACCAGTTTTTTGGCAGATTTTTCTCCAGATGATATTGGTGGTCATAGGAAATACCCTCGTTCAATGG
GCCAATCCTCTTCTTTATAATCGCCTAATCTTCTCTTATACCAGAGATTTACGAGAGCGAATCATTCATAAGCTCCATCG
TTTACCAATTGCTTTTGTGGATAGGCAAGGTAGTGGGGAGATGGTTAGTCGTGTGACCACGGACATAGAGCAGTTGGCAG
CTGGCTTGACCATGATTTTTAATCAATTTTTCATTGGTGTCTTGATGATTTTGGTTAGTATTCTGGCTATGCTCCAAATT
CATCTCCTCATGACCCTCTTGGTCTTGCTGTTGACGCCACTGTCCATGGTGATTTCACGCTTTATTGCCAAGAAATCTTA
TCATCTCTTCCAGAAGCAAACAGAGACGAGGGGGATTCAGACTCAGTTGATTGAAGAATCGCTTAGCCAGCAAACTATTA
TCCAGACTTTCAATGCTCAAACAGAGTTTATCCAAAGACTGCACGAGGCGAATGCCAACTACGCAGGCTATTCTCAGTCA
GCCATCTTTTATTCATCAACGGTCAATCCTTCGACTCGCTTTGTCAATGCACTCATCTATGCTCTTCTTGCTGGAGTGGG
AGCTTATCGTATCATGATGGGATCCACCTTGACCATTGGGCGTTTAGTAACTTTTTTGAACTATGTCCAGCAGTACACTA
AGCCCTTTAACGATATTTCTTCAGTTCTAGCCGAATTGCAAAGTGCTCTCGCTTGTGCAGAGCGTGTTTATGCTGTCTTA
GAGAGCTCCGAGGTGTCTGAAACAGGTAAGGAAGTCTTGACCAGCGACCAAGTCAAGGGAGCTATTTCCTTTAAACATGT
TACTTTTGGCTACCATCCAGAAAAAATCTTGATTAAGGACTTGTCTATCGATATCCCAGCTGGTAGCAAGGTGGCCATCG
TTGGTCCTACAGGTGCTGGCAAATCAACCCTCATCAATCTCCTCATGCGTTTTTATCCCATCAACTCGGGAGATATCTTG
CTAGACGGTCACTCGATTTATGACTATACCCGAGCATCATTGAGACAGCAGTTTGGCATGGTGCTACAGGAAACCTGGCT
CAAGCAAGGGACCATTCATGACAATATTGCATTTGGCAATCCTGAAGCCAGTCGAGAGCAGGTGATTGCTGCTGCCAAAG
CAGCCAATGCAGACTTTTTCATCCAACAGTTGCCACAGGGCTATGATACCAAACTGGAAAATGCGGGTGAATCTCTCTCT
GTCGGTCAGGCTCAGCTCTTGACCATTGCCCGTGTCTTTCTGGCTATTCCAAAGATTCTTATCTTAGACGAGGCGACTTC
TTCCATCGATACGCGGACAGAGGTGCTGGTACAGGATGCCTTTGCCAAACTGATGAAAGGGCGCACAAGCTTTATCATCG
CCCACCGCCTGTCAACCATTCAGGATGCGGATTTGATTCTTGTCTTGGTAGATGGTGACATTGTGGAACATGGCAATCAT
CAGGACCTCATGGCTAGAAAGGGCAAGTATTACCAAATGCAGCGAGCTGCAGTTTTTAGCTCTGAATAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(359-507)

ABC transporter transmembrane region (ABC_membrane)

(24-295)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

37.61

97.766

0.368