Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   FOB91_RS01985 Genome accession   NZ_CP046328
Coordinates   412666..414402 (-) Length   578 a.a.
NCBI ID   WP_012000590.1    Uniprot ID   A8AXG4
Organism   Streptococcus gordonii strain FDAARGOS_683     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 407666..419402
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FOB91_RS01970 (FOB91_01970) - 409134..410156 (+) 1023 WP_012000587.1 YdcF family protein -
  FOB91_RS01975 (FOB91_01975) - 410205..410759 (-) 555 WP_012000588.1 GNAT family N-acetyltransferase -
  FOB91_RS01980 (FOB91_01980) rcrQ 410875..412656 (-) 1782 WP_012000589.1 ABC transporter ATP-binding protein Regulator
  FOB91_RS01985 (FOB91_01985) rcrP 412666..414402 (-) 1737 WP_012000590.1 ABC transporter ATP-binding protein Regulator
  FOB91_RS01990 (FOB91_01990) - 414664..415125 (-) 462 WP_012000592.1 hypothetical protein -
  FOB91_RS01995 (FOB91_01995) rplL 415337..415705 (-) 369 WP_008808621.1 50S ribosomal protein L7/L12 -
  FOB91_RS02000 (FOB91_02000) rplJ 415780..416280 (-) 501 WP_012000594.1 50S ribosomal protein L10 -
  FOB91_RS02005 (FOB91_02005) trmFO 416533..417867 (-) 1335 WP_012000595.1 methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO -
  FOB91_RS02010 (FOB91_02010) - 418018..418512 (-) 495 WP_012000596.1 phosphoribosylanthranilate isomerase -
  FOB91_RS02015 (FOB91_02015) - 418532..419239 (-) 708 WP_012000597.1 DUF3307 domain-containing protein -

Sequence

Protein


Download         Length: 578 a.a.        Molecular weight: 65272.26 Da        Isoelectric Point: 5.2111

>NTDB_id=350362 FOB91_RS01985 WP_012000590.1 412666..414402(-) (rcrP) [Streptococcus gordonii strain FDAARGOS_683]
MKYIWSYLRRYPKWLLLDFIGAIFFVIVNLGLPTVLARMIDEGINQGDTSRLYFWAFIMLLVIVAGVFGRIVLSYAAGKL
TTSMVRDMRNDLYAKLQEYSHHEYEQIGVSSLVTRITSDAFVLMQFAEQSLKMGVITPMMMLSSVFMIFLTSPSLAWIVA
ISVPFLAVVVWYVAVKTRPLSEKQQKTLDKINQYARENLTGLRVIRAFAREEFQEERFASENEIYADNSNKLFKLTGLTE
PLFVQIIIAMIVAIVWFALQPLGSGELRIGDLVAFIEYSFHALLSFLFLSSLFTMYPRTAVSSERLKEVMDMPISINPNE
DGITETESHGYLEFDNVTFAYPGETESPVLHNVSFKAKPGETVAFIGSTGSGKSSLVQLIPRFYDVTLGKILVDGVDVRD
YQLKALRQKIGFIPQKALLFTGTIAENLRYGKEDASHEELNQAADVAQAKEFIESREERFETHLAEGGSNLSGGQKQRLS
IARAVVKEPDIYIFDDSFSALDYKTDAILRRRLKEVTQNSTVLIVAQRVGTIMDADQIIVLDKGEIVGRGRHEELMESNA
IYREIAQSQLNSQSLTEE

Nucleotide


Download         Length: 1737 bp        

>NTDB_id=350362 FOB91_RS01985 WP_012000590.1 412666..414402(-) (rcrP) [Streptococcus gordonii strain FDAARGOS_683]
ATGAAATATATTTGGTCTTATTTAAGAAGATATCCTAAATGGCTCTTATTGGATTTCATAGGAGCGATTTTCTTTGTTAT
TGTAAATTTAGGCCTTCCTACAGTTCTTGCTCGTATGATTGATGAGGGGATTAACCAAGGAGATACCAGTCGTCTGTATT
TTTGGGCATTTATAATGTTATTAGTTATTGTAGCTGGAGTCTTTGGTAGAATTGTCCTGTCCTATGCAGCTGGCAAATTA
ACGACTAGTATGGTTCGGGATATGAGAAATGATCTTTACGCTAAGCTACAAGAGTATTCTCATCATGAATATGAACAGAT
TGGTGTGTCTTCGCTTGTGACACGGATAACAAGTGATGCTTTTGTTCTCATGCAATTTGCTGAGCAGAGCTTAAAAATGG
GGGTTATTACGCCCATGATGATGCTTTCAAGTGTTTTTATGATCTTTTTAACAAGTCCGTCCTTGGCTTGGATTGTTGCC
ATTTCTGTTCCTTTTTTGGCGGTAGTGGTTTGGTATGTGGCTGTTAAGACGCGTCCTCTATCAGAGAAGCAACAAAAAAC
ATTGGATAAAATTAACCAATATGCTCGAGAGAATTTAACAGGTCTACGGGTCATTCGTGCATTTGCCAGAGAAGAATTTC
AAGAGGAACGTTTTGCTTCAGAAAATGAAATCTATGCTGATAACTCCAATAAACTATTCAAACTGACAGGATTAACAGAA
CCTTTATTTGTTCAAATCATTATTGCCATGATTGTCGCAATTGTCTGGTTTGCTTTGCAACCTTTAGGAAGTGGAGAATT
AAGAATCGGTGATTTAGTTGCCTTTATTGAGTACAGTTTTCATGCTTTACTTTCTTTCTTATTTTTATCAAGTCTCTTTA
CCATGTATCCTAGAACAGCCGTTTCTAGTGAACGTCTGAAGGAAGTTATGGATATGCCTATCTCCATTAATCCTAATGAA
GATGGTATTACTGAAACTGAAAGTCATGGTTACCTGGAGTTTGATAATGTAACCTTTGCTTATCCAGGTGAGACGGAAAG
TCCAGTTCTTCATAATGTTTCTTTCAAGGCCAAACCTGGTGAAACTGTTGCCTTTATTGGTTCTACAGGATCAGGTAAGT
CTTCCTTAGTACAATTGATACCACGTTTTTATGATGTTACTTTAGGGAAAATTTTAGTTGATGGAGTTGATGTCAGAGAC
TATCAGCTTAAAGCTTTACGTCAAAAGATTGGTTTCATTCCCCAAAAAGCTTTGCTTTTTACTGGTACCATCGCAGAAAA
CTTGAGGTATGGTAAAGAAGATGCCAGTCATGAAGAACTAAATCAAGCTGCAGATGTGGCTCAAGCTAAAGAATTTATCG
AAAGTCGCGAAGAGAGATTTGAGACTCATCTTGCTGAAGGAGGAAGCAATCTTTCTGGTGGTCAAAAACAACGTCTGTCA
ATCGCTCGTGCTGTTGTAAAAGAGCCGGATATATATATCTTTGATGATTCGTTTTCAGCTCTCGACTACAAGACGGATGC
TATCTTACGTCGTCGTTTGAAAGAAGTAACCCAGAATTCAACGGTTTTAATCGTTGCCCAGCGGGTTGGCACGATTATGG
ATGCAGATCAGATTATCGTTTTGGATAAGGGTGAAATCGTTGGTCGGGGAAGACATGAAGAACTCATGGAATCCAATGCC
ATTTATCGAGAAATTGCTCAATCCCAGCTTAACAGTCAATCATTAACAGAAGAATAG

Domains

Predicted by InterProScan.

ABC transporter transmembrane region (ABC_membrane)

(16-279)

ABC transporter (ABC_tran)

(350-497)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A8AXG4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

38.93

93.772

0.365

Multiple sequence alignment