Detailed information NTG0349723

Bioinformatically predicted

Overview

• Name: recD/recD2/recDB
• Type: Machinery gene
• Locus tag: GJ664_RS08015
• Genome accession: NZ_CP046037
• Coordinates: 1601591..1604119 (+)
• Length: 842 a.a.
• NCBI ID: WP_154255267.1
• Uniprot ID: -
• Organism: Latilactobacillus sakei strain CBA3614
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1596591..1609119

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GJ664_RS07995 (GJ664_07995)	-	1597232..1598530 (+)	1299	WP_035147224.1	pyrimidine-nucleoside phosphorylase	-
GJ664_RS08000 (GJ664_08000)	-	1598767..1600101 (+)	1335	WP_035147226.1	FAD-dependent oxidoreductase	-
GJ664_RS08005 (GJ664_08005)	-	1600255..1600914 (+)	660	WP_141265918.1	histidine phosphatase family protein	-
GJ664_RS08010 (GJ664_08010)	-	1600926..1601585 (+)	660	WP_141265917.1	tetratricopeptide repeat protein	-
GJ664_RS08015 (GJ664_08015)	recD/recD2/recDB	1601591..1604119 (+)	2529	WP_154255267.1	ATP-dependent RecD-like DNA helicase	Machinery gene
GJ664_RS08020 (GJ664_08020)	-	1604162..1605373 (+)	1212	WP_011374512.1	GNAT family N-acetyltransferase	-
GJ664_RS08025 (GJ664_08025)	-	1605434..1605673 (-)	240	WP_035147235.1	hypothetical protein	-
GJ664_RS08030 (GJ664_08030)	-	1605938..1606549 (+)	612	WP_056948489.1	LysE/ArgO family amino acid transporter	-
GJ664_RS08035 (GJ664_08035)	-	1606641..1607753 (+)	1113	WP_061827294.1	DNA alkylation repair protein	-
GJ664_RS08040 (GJ664_08040)	-	1607932..1608648 (+)	717	WP_035147513.1	MerR family transcriptional regulator	-

Sequence

Protein

• Length: 842 a.a.
• Molecular weight: 93340.54 Da
• Isoelectric Point: 5.1314

>NTDB_id=349723 GJ664_RS08015 WP_154255267.1 1601591..1604119(+) (recD/recD2/recDB) [Latilactobacillus sakei strain CBA3614]
MAILETENTVDNKPTVTGTVQSVFYENPGNFFKILLIKIAHKTINWHEPEIVVTGSFGEIKEDERYTFYGKVITHPKYGQ
QFQADNYQVDQPTTKTGLVAYLSGEKFAGIGQKTAEKIVDTLGLDAIDKILADSTVLAPLGLNDKKQATLVETLTINNGM
EQIIIGLNNYGFGSSMAYNIYQTYHEDTLKIIQENPYQLVADIAGIGFKRADNLAEKIGFAADSPARIQGALMQALNELT
NQAGDTFTQAKPLLAASIQLMEQARNVAIDPNLVAEQLMALAHDGKVVGDENRIYPNGLYNAEWQIANHLMRIENERDKI
SYPKHDLDKEIRRLEKRFKMSYDDVQKNAIKLAMTHRAFLLTGGPGTGKTTIINGIVTLFAELNGLSLDINEYKDTPFPI
LLAAPTGRAAKRMSETTGLPASTIHRLLGITGRENNPDIDSKELEGGLLIVDEMSMVDTYLFRSLIRAVPSNMQVVFVGD
KDQLPSVGAGQVFFDLLQSQAIPAIELQQIYRQDDESTIIPLAHEINQGQLPADLLQPQKDRSFIQCSPYQIESVIKQVV
TKAKERGFETKDIQVLAPMYRGAAGIDQLNPMIQNIMNPKVDDRKKQVSLGNVHYRIGDKILHLVNSPELNVFNGEIGQI
TGITYAKDSDDKMDELTIAFDSTEITYKRTEWHKITLAYCTSIHKAQGSEFEMVILPLVNQYQRMLKRNLLYTAVTRARS
LLILIGEPSAFDKAAKELSANRQTTLKERIISVFNGEKVSQAVKTASVGLTEAKPTVEKPTPAKEVAPEQLALVGDADDS
EETIQEAPANYELTPALVSGHQIDPMIGMADLTPYTFMTSAK

Nucleotide

• Length: 2529 bp

>NTDB_id=349723 GJ664_RS08015 WP_154255267.1 1601591..1604119(+) (recD/recD2/recDB) [Latilactobacillus sakei strain CBA3614]
ATGGCGATTTTGGAAACAGAAAATACGGTCGATAATAAACCAACCGTTACCGGAACGGTCCAAAGTGTTTTTTACGAGAA
TCCCGGTAACTTTTTTAAGATTCTCTTGATTAAAATTGCCCATAAGACAATCAATTGGCACGAGCCAGAGATTGTCGTGA
CTGGTAGTTTTGGTGAGATTAAAGAAGACGAACGCTATACGTTTTATGGCAAAGTCATCACCCATCCTAAATACGGTCAA
CAATTTCAAGCTGACAACTATCAAGTTGACCAACCGACGACTAAGACTGGCTTAGTCGCCTATTTATCTGGCGAAAAATT
TGCTGGCATCGGTCAAAAAACGGCTGAGAAAATTGTCGATACCTTAGGATTAGACGCGATTGATAAGATCTTAGCGGATT
CAACCGTTTTAGCACCGCTGGGTTTAAATGATAAGAAACAAGCGACGTTGGTTGAAACGCTGACGATTAATAATGGGATG
GAACAAATTATCATTGGTCTCAATAATTACGGTTTTGGGAGCTCGATGGCCTATAATATCTATCAGACTTATCACGAAGA
TACCTTGAAGATTATTCAAGAAAATCCTTATCAACTAGTGGCCGACATTGCCGGTATTGGGTTTAAACGAGCGGATAATT
TAGCTGAGAAGATTGGGTTTGCAGCCGATTCACCAGCGCGGATTCAAGGGGCGCTGATGCAAGCCTTGAACGAACTGACC
AATCAGGCCGGCGATACGTTTACCCAGGCGAAGCCGTTATTAGCAGCCAGCATTCAATTGATGGAACAGGCCCGGAACGT
GGCGATTGATCCGAATTTAGTAGCAGAGCAATTAATGGCCTTAGCACACGATGGCAAAGTCGTCGGAGATGAAAATCGGA
TTTATCCGAATGGTTTGTACAACGCGGAATGGCAAATTGCGAACCACTTGATGCGGATTGAAAATGAACGGGATAAAATT
AGTTATCCTAAACATGATCTGGATAAAGAAATTCGTCGGCTCGAAAAACGCTTTAAGATGAGCTATGATGATGTCCAAAA
AAATGCAATTAAATTAGCGATGACTCACAGAGCCTTTCTACTAACAGGGGGCCCTGGTACTGGGAAAACAACGATTATTA
ATGGGATTGTGACTTTATTTGCTGAGTTAAACGGTCTTTCGCTTGATATCAACGAATATAAAGACACACCATTTCCAATT
TTATTGGCAGCACCTACTGGGCGGGCCGCTAAACGGATGAGCGAAACAACTGGCTTGCCAGCTAGCACGATTCATCGCTT
ATTAGGGATTACGGGACGTGAAAATAATCCTGATATCGATAGTAAGGAACTAGAAGGCGGCTTATTAATTGTCGATGAAA
TGTCGATGGTTGATACGTACCTCTTTAGATCATTGATTCGAGCAGTGCCTAGCAATATGCAAGTCGTCTTTGTTGGTGAT
AAAGATCAGTTGCCATCAGTTGGCGCGGGGCAAGTCTTTTTTGATTTACTGCAGAGTCAGGCAATTCCGGCAATCGAACT
GCAACAAATCTACCGACAAGACGATGAGTCGACGATTATTCCGCTAGCCCATGAGATTAATCAGGGCCAACTACCAGCTG
ATCTACTCCAACCGCAAAAGGATCGGAGCTTTATTCAGTGCAGTCCTTATCAGATTGAATCAGTGATTAAACAAGTGGTC
ACTAAGGCAAAAGAACGGGGTTTTGAGACGAAGGACATTCAAGTGCTAGCACCGATGTATCGTGGGGCAGCCGGAATTGA
TCAATTAAATCCAATGATTCAAAATATTATGAATCCAAAGGTCGATGATCGTAAGAAACAAGTCAGTTTAGGCAACGTTC
ATTATCGGATTGGCGATAAGATTTTACATCTGGTTAACAGTCCGGAACTAAACGTCTTTAACGGTGAAATTGGGCAAATT
ACTGGGATTACGTATGCTAAAGATAGTGATGACAAGATGGACGAGTTAACGATTGCCTTTGATAGTACCGAAATTACCTA
TAAACGGACGGAATGGCATAAAATTACGTTGGCGTATTGTACGTCGATTCATAAGGCTCAAGGTTCTGAATTTGAAATGG
TAATTCTACCCTTGGTTAACCAATATCAACGGATGTTGAAACGAAACTTGTTGTATACAGCGGTGACACGGGCGCGGTCC
TTACTGATTTTAATTGGGGAACCAAGTGCCTTTGATAAGGCGGCCAAGGAACTCTCCGCAAACCGGCAAACAACGCTTAA
AGAACGGATTATCAGCGTCTTTAATGGTGAAAAGGTGAGCCAAGCGGTCAAAACCGCTAGTGTTGGCTTAACGGAAGCTA
AACCAACTGTTGAAAAACCAACGCCGGCTAAAGAAGTAGCGCCAGAACAATTGGCGTTAGTGGGCGATGCAGATGACAGT
GAAGAGACAATTCAAGAAGCACCTGCTAATTATGAATTAACACCAGCCTTGGTGAGTGGTCATCAGATTGACCCGATGAT
TGGAATGGCGGATTTAACGCCGTACACATTCATGACAAGTGCTAAGTAG

Domains

Predicted by InterProScan.

• ATP-dependent RecD-like DNA helicase SH3 domain (SH3_13) (589-660)

• Helix-hairpin-helix containing domain (HHH_RecD2) (157-247)

• UvrD-like helicase C-terminal domain (UvrD_C_2) (678-725)

• AAA domain (AAA_30) (342-547)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recD/recD2/recDB	Bacillus subtilis subsp. subtilis str. 168	47.067	89.074	0.419