Detailed information    

insolico Bioinformatically predicted

Overview

Name   crp   Type   Regulator
Locus tag   E0Z08_RS12835 Genome accession   NZ_CP037424
Coordinates   2597510..2598217 (+) Length   235 a.a.
NCBI ID   WP_004696183.1    Uniprot ID   A0A7H8SJ59
Organism   Acinetobacter johnsonii strain M19     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2592510..2603217
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E0Z08_RS12825 (E0Z08_12825) clpB 2593970..2596549 (-) 2580 WP_010327124.1 ATP-dependent chaperone ClpB -
  E0Z08_RS12830 (E0Z08_12830) - 2596940..2597362 (-) 423 WP_010327125.1 OsmC family protein -
  E0Z08_RS12835 (E0Z08_12835) crp 2597510..2598217 (+) 708 WP_004696183.1 cAMP-activated global transcriptional regulator CRP Regulator
  E0Z08_RS12840 (E0Z08_12840) - 2598404..2599453 (+) 1050 WP_010327126.1 NADP(H)-dependent aldo-keto reductase -
  E0Z08_RS12845 (E0Z08_12845) - 2599579..2600352 (-) 774 WP_004982314.1 M48 family metallopeptidase -
  E0Z08_RS12850 (E0Z08_12850) - 2600539..2600844 (-) 306 WP_004696180.1 hypothetical protein -
  E0Z08_RS12855 (E0Z08_12855) - 2601046..2602365 (-) 1320 WP_004696178.1 adenylosuccinate synthase -

Sequence

Protein


Download         Length: 235 a.a.        Molecular weight: 26414.97 Da        Isoelectric Point: 4.6788

>NTDB_id=349696 E0Z08_RS12835 WP_004696183.1 2597510..2598217(+) (crp) [Acinetobacter johnsonii strain M19]
MTSSFSQLSTDALSPGQLPESVKALLKRAYINRYPKRTTIVDAGSESKSLYLILKGSVSIILREDDEREIVVAYLNAGDF
FGEMGLFEANSQRTAEVRTRDVCEIAEVTYENFHELSKQYPDLSYAVFAQLVRRLKNTTRKVTDLAFIDVSGRIARCLID
LSSQPEAMILPNGRQIRITRQEIGRIVGCSREMVGRVLKTLEEQGMIETDGKAILIFDASLEESKANADDYEDEE

Nucleotide


Download         Length: 708 bp        

>NTDB_id=349696 E0Z08_RS12835 WP_004696183.1 2597510..2598217(+) (crp) [Acinetobacter johnsonii strain M19]
ATGACTTCAAGCTTTTCACAATTAAGCACTGATGCGCTGTCTCCAGGTCAACTCCCCGAGTCAGTCAAAGCATTATTAAA
ACGCGCATATATTAATCGTTATCCTAAGCGTACCACCATCGTAGATGCAGGCTCAGAATCTAAATCTTTATATTTGATTT
TAAAAGGTTCGGTCTCCATTATTCTGCGTGAAGACGATGAACGTGAAATCGTGGTCGCTTATTTAAATGCGGGTGATTTT
TTTGGGGAAATGGGTCTATTCGAAGCAAACTCACAACGTACTGCAGAAGTGCGTACCCGTGATGTCTGCGAAATTGCTGA
AGTGACTTATGAAAACTTCCATGAGCTCAGCAAACAATACCCTGACCTAAGCTATGCAGTATTTGCACAGCTAGTTCGCC
GTTTAAAAAATACCACTCGTAAAGTGACTGACCTTGCATTTATCGACGTTTCAGGTCGTATTGCACGTTGCCTAATCGAC
TTATCTTCGCAACCTGAAGCGATGATTTTACCAAATGGCCGCCAAATTCGTATTACGCGTCAAGAGATTGGACGTATTGT
CGGTTGTTCACGTGAAATGGTTGGTCGTGTTTTGAAAACACTCGAAGAGCAAGGCATGATCGAAACTGATGGTAAAGCCA
TCTTAATTTTTGATGCCTCTTTAGAAGAGTCAAAAGCGAATGCTGATGACTATGAAGACGAAGAATAA

Domains

Predicted by InterproScan.

Cyclic nucleotide-binding domain (cNMP_binding)

(33-120)

Bacterial regulatory proteins, crp family (Crp)

(176-207)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7H8SJ59

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  crp Acinetobacter baumannii D1279779

91.064

100

0.911
  crp Vibrio cholerae strain A1552

46.602

87.66

0.409
  crp Haemophilus influenzae Rd KW20

48.205

82.979

0.4

Multiple sequence alignment