Detailed information NTG0347753

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: GII78_RS14890
• Genome accession: NZ_CP045824
• Coordinates: 2820935..2822200 (+)
• Length: 421 a.a.
• NCBI ID: WP_015714437.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain MB8_B10
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2815935..2827200

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GII78_RS14870 (GII78_14870)	yrrB	2817306..2817926 (-)	621	WP_211197310.1	tetratricopeptide repeat protein	-
GII78_RS14875 (GII78_14875)	mnmA	2818012..2819127 (-)	1116	WP_004398509.1	tRNA 2-thiouridine(34) synthase MnmA	-
GII78_RS14880 (GII78_14880)	iscSA	2819155..2820297 (-)	1143	WP_003229769.1	cysteine desulfurase family protein	-
GII78_RS14885 (GII78_14885)	cymR	2820316..2820732 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
GII78_RS14890 (GII78_14890)	rarA	2820935..2822200 (+)	1266	WP_015714437.1	replication-associated recombination protein A	Machinery gene
GII78_RS14895 (GII78_14895)	tcdA	2822240..2823004 (-)	765	WP_014480428.1	tRNA threonylcarbamoyladenosine dehydratase	-
GII78_RS14905 (GII78_14905)	aspS	2823339..2825117 (-)	1779	WP_003229758.1	aspartate--tRNA ligase	-
GII78_RS14910 (GII78_14910)	hisS	2825131..2826405 (-)	1275	WP_003229755.1	histidine--tRNA ligase	-
GII78_RS14915 (GII78_14915)	yrzK	2826787..2826957 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46500.35 Da
• Isoelectric Point: 7.2043

>NTDB_id=347753 GII78_RS14890 WP_015714437.1 2820935..2822200(+) (rarA) [Bacillus subtilis strain MB8_B10]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=347753 GII78_RS14890 WP_015714437.1 2820935..2822200(+) (rarA) [Bacillus subtilis strain MB8_B10]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGAATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGATCTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCGATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAAGATATCGGTTTAGCAAGCCCGCAAGCCG
GTCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGGGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACAGGAAAATTCGAATCCGCCTTAAAGCAGGTGTACGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.762	100	0.998