Detailed information NTG0347600

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: GII79_RS14815
• Genome accession: NZ_CP045823
• Coordinates: 2814923..2816188 (+)
• Length: 421 a.a.
• NCBI ID: WP_015714437.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain MB8_B1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2809923..2821188

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GII79_RS14795 (GII79_14795)	yrrB	2811294..2811914 (-)	621	WP_211197310.1	tetratricopeptide repeat protein	-
GII79_RS14800 (GII79_14800)	mnmA	2812000..2813115 (-)	1116	WP_004398509.1	tRNA 2-thiouridine(34) synthase MnmA	-
GII79_RS14805 (GII79_14805)	iscSA	2813143..2814285 (-)	1143	WP_003229769.1	cysteine desulfurase family protein	-
GII79_RS14810 (GII79_14810)	cymR	2814304..2814720 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
GII79_RS14815 (GII79_14815)	rarA	2814923..2816188 (+)	1266	WP_015714437.1	replication-associated recombination protein A	Machinery gene
GII79_RS14820 (GII79_14820)	tcdA	2816228..2816992 (-)	765	WP_014480428.1	tRNA threonylcarbamoyladenosine dehydratase	-
GII79_RS14830 (GII79_14830)	aspS	2817327..2819105 (-)	1779	WP_003229758.1	aspartate--tRNA ligase	-
GII79_RS14835 (GII79_14835)	hisS	2819119..2820393 (-)	1275	WP_003229755.1	histidine--tRNA ligase	-
GII79_RS14840 (GII79_14840)	yrzK	2820775..2820945 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46500.35 Da
• Isoelectric Point: 7.2043

>NTDB_id=347600 GII79_RS14815 WP_015714437.1 2814923..2816188(+) (rarA) [Bacillus subtilis strain MB8_B1]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=347600 GII79_RS14815 WP_015714437.1 2814923..2816188(+) (rarA) [Bacillus subtilis strain MB8_B1]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGAATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGATCTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCGATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAAGATATCGGTTTAGCAAGCCCGCAAGCCG
GTCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGGGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACAGGAAAATTCGAATCCGCCTTAAAGCAGGTGTACGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.762	100	0.998