Detailed information NTG0347448

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: GII80_RS14755
• Genome accession: NZ_CP045821
• Coordinates: 2793160..2794425 (+)
• Length: 421 a.a.
• NCBI ID: WP_004398500.1
• Uniprot ID: O34528
• Organism: Bacillus subtilis strain MB8_B7
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2788160..2799425

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GII80_RS14735 (GII80_14735)	yrrB	2789531..2790151 (-)	621	WP_010886584.1	tetratricopeptide repeat protein	-
GII80_RS14740 (GII80_14740)	mnmA	2790237..2791352 (-)	1116	WP_004398509.1	tRNA 2-thiouridine(34) synthase MnmA	-
GII80_RS14745 (GII80_14745)	iscSA	2791383..2792522 (-)	1140	WP_003246057.1	cysteine desulfurase family protein	-
GII80_RS14750 (GII80_14750)	cymR	2792541..2792957 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
GII80_RS14755 (GII80_14755)	rarA	2793160..2794425 (+)	1266	WP_004398500.1	replication-associated recombination protein A	Machinery gene
GII80_RS14760 (GII80_14760)	tcdA	2794467..2795231 (-)	765	WP_003229763.1	tRNA threonylcarbamoyladenosine dehydratase	-
GII80_RS14770 (GII80_14770)	aspS	2795567..2797345 (-)	1779	WP_003229758.1	aspartate--tRNA ligase	-
GII80_RS14775 (GII80_14775)	hisS	2797359..2798633 (-)	1275	WP_003229755.1	histidine--tRNA ligase	-
GII80_RS14780 (GII80_14780)	yrzK	2799015..2799185 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46514.38 Da
• Isoelectric Point: 7.2043

>NTDB_id=347448 GII80_RS14755 WP_004398500.1 2793160..2794425(+) (rarA) [Bacillus subtilis strain MB8_B7]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPELIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=347448 GII80_RS14755 WP_004398500.1 2793160..2794425(+) (rarA) [Bacillus subtilis strain MB8_B7]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGAATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGAACTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCAATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAGGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGGGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACTGGAAAGTTCGAATCTGCCTTAAAGCAGGTGTACGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

3D structure

• AlphaFold DB: O34528

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	100	100	1