Detailed information NTG0347411

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: Pstu14405_RS14095
• Genome accession: NZ_CP036186
• Coordinates: 3101542..3103767 (-)
• Length: 741 a.a.
• NCBI ID: WP_003283694.1
• Uniprot ID: -
• Organism: Stutzerimonas stutzeri strain ATCC 14405
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3096542..3108767

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Pstu14405_RS14060 (Pstu14405_14125)	murB	3096935..3097954 (-)	1020	WP_003283684.1	UDP-N-acetylmuramate dehydrogenase	-
Pstu14405_RS14065 (Pstu14405_14130)	-	3097951..3098415 (-)	465	WP_003283686.1	low molecular weight protein-tyrosine-phosphatase	-
Pstu14405_RS14070 (Pstu14405_14135)	kdsB	3098417..3099181 (-)	765	WP_003283687.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
Pstu14405_RS14075 (Pstu14405_14140)	-	3099178..3099363 (-)	186	WP_003283689.1	Trm112 family protein	-
Pstu14405_RS14080 (Pstu14405_14145)	lpxK	3099409..3100413 (-)	1005	WP_003283690.1	tetraacyldisaccharide 4'-kinase	-
Pstu14405_RS14085 (Pstu14405_14150)	-	3100413..3100841 (-)	429	WP_003283692.1	ExbD/TolR family protein	-
Pstu14405_RS14090 (Pstu14405_14155)	-	3100838..3101470 (-)	633	WP_003283693.1	MotA/TolQ/ExbB proton channel family protein	-
Pstu14405_RS14095 (Pstu14405_14160)	comA	3101542..3103767 (-)	2226	WP_003283694.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
Pstu14405_RS14100 (Pstu14405_14165)	-	3103917..3104432 (+)	516	WP_003283695.1	DUF2062 domain-containing protein	-
Pstu14405_RS14105 (Pstu14405_14170)	-	3104440..3105684 (-)	1245	WP_003283696.1	lipoprotein-releasing ABC transporter permease subunit	-
Pstu14405_RS14110 (Pstu14405_14175)	lolD	3105684..3106382 (-)	699	WP_003283698.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
Pstu14405_RS14115 (Pstu14405_14180)	-	3106390..3107637 (-)	1248	WP_003283699.1	lipoprotein-releasing ABC transporter permease subunit	-
Pstu14405_RS14120 (Pstu14405_14185)	-	3107735..3108307 (+)	573	WP_036991712.1	PilZ domain-containing protein	-
Pstu14405_RS14125 (Pstu14405_14190)	-	3108311..3108619 (+)	309	WP_003283702.1	hypothetical protein	-

Sequence

Protein

• Length: 741 a.a.
• Molecular weight: 80483.25 Da
• Isoelectric Point: 10.2162

>NTDB_id=347411 Pstu14405_RS14095 WP_003283694.1 3101542..3103767(-) (comA) [Stutzerimonas stutzeri strain ATCC 14405]
MRTWMLALAAGLVLPRFLPALPAAWGWLALAALGCVLLVRRRWAALGLFLLGFSWACFQSQSAMDDRLPVSKDGRTFWIE
GTVVGLPVSADNVVRFELEDIDSRHDGLPSKVRLSWYGGPTLQAGERWRLAARLKRPRGLVNPQSFDYEAWLLARRIGAT
GTVKAGERLLMPAATEGWRDRLRARLMAIPASGRQGAIAALVVGDDSGLSRSDWQVLQNTGTVHLMVISGQHIGILAGML
YGLIALLARSGLWPRRVPWLPWACGLALTGALAYGWLAGFDVPVRRACLMVAVVLLWRLRFRHLGVWQPLLLALNGVLLI
DPLVTLQPGFWLSFGAVAVLALVFSGRLGQWAWWKALVRAQWAAAIGLLPLLLALGLPVSASGPLANLIAVPWVSLTVPF
ALLGTVLLPLGGVGETLLLAVGWCLALLFELLTIISGWQPAWLAGGLSFWAWALIALGVLLLLMPSGLPLRALGLIVLLP
LAFPPSASVSDGQAQVWMLDVGQGLSVLVRTRKHALLYDAGPSQGDFDMGERVVFPSLRALGVDGLNMLLLSHADNDHAG
GAQAIQRLMPVHSVVSGEPQRHPAGLNAEMCENGAEWQWDNVRFRLWHWQAAGDSNQRSCVLLVEANGERVLLTGDIDQA
AERALLLSGPAVQAQWLLLPHHGSRSSSSEPFLRAVGPTAALISRSLHNAFGHPHPNVIARLEALGIESYDTALHGAVRI
DLGRFSPAQVQRAERRFWREK

Nucleotide

• Length: 2226 bp

>NTDB_id=347411 Pstu14405_RS14095 WP_003283694.1 3101542..3103767(-) (comA) [Stutzerimonas stutzeri strain ATCC 14405]
ATGCGCACATGGATGCTGGCGCTCGCCGCTGGTCTCGTCCTGCCACGTTTCTTGCCAGCACTACCTGCCGCCTGGGGCTG
GTTGGCGCTTGCTGCCCTAGGCTGTGTGCTCCTTGTAAGAAGGCGCTGGGCGGCGCTGGGGCTTTTTCTTCTGGGTTTCT
CCTGGGCATGCTTTCAGAGCCAGAGCGCCATGGACGATCGCCTGCCCGTATCGAAGGACGGCCGGACGTTCTGGATCGAA
GGGACAGTGGTCGGCTTGCCCGTCAGCGCCGATAACGTGGTCCGGTTCGAGCTGGAGGACATCGACTCACGGCATGACGG
GCTGCCGTCCAAAGTACGACTGTCCTGGTATGGCGGCCCGACACTGCAAGCTGGGGAGCGCTGGCGGCTTGCCGCGAGAC
TGAAGCGTCCACGCGGTCTGGTCAATCCGCAGTCGTTCGATTACGAAGCCTGGCTGTTGGCGCGGCGAATAGGCGCAACT
GGCACCGTCAAGGCCGGCGAGCGCCTCTTGATGCCGGCGGCGACCGAAGGTTGGCGCGACCGGTTGAGAGCCCGCTTGAT
GGCCATTCCTGCCTCTGGGCGGCAGGGTGCGATCGCTGCACTGGTGGTAGGCGATGATTCCGGTTTGAGTCGAAGCGATT
GGCAGGTGTTGCAGAACACCGGCACGGTGCACCTGATGGTCATTTCCGGGCAGCACATCGGCATCCTGGCCGGGATGCTG
TATGGGCTGATCGCGCTGTTGGCGCGCTCAGGTCTTTGGCCGCGACGGGTGCCATGGCTACCCTGGGCGTGCGGTCTCGC
GCTTACCGGTGCGCTGGCATACGGCTGGCTGGCCGGGTTCGATGTTCCGGTACGGCGTGCCTGTCTCATGGTCGCTGTGG
TCCTGCTCTGGCGCTTGCGCTTTCGCCATCTGGGAGTCTGGCAGCCCCTGTTGTTGGCGCTCAACGGCGTCCTGCTGATC
GACCCGCTGGTTACGCTGCAGCCGGGCTTTTGGCTGTCCTTTGGTGCAGTGGCGGTGCTGGCGCTTGTGTTTTCTGGACG
TCTGGGTCAATGGGCCTGGTGGAAAGCGTTGGTACGTGCGCAGTGGGCGGCCGCCATCGGCTTGCTGCCACTTCTATTGG
CCCTGGGGCTGCCGGTGAGTGCCAGCGGTCCGTTGGCCAATCTCATTGCCGTACCCTGGGTGAGTTTGACCGTGCCCTTT
GCCTTGCTGGGCACTGTGTTGCTGCCGTTAGGGGGAGTTGGTGAGACGTTGCTGTTGGCGGTCGGCTGGTGCCTGGCGCT
GCTGTTTGAGCTGTTGACGATTATTTCGGGTTGGCAGCCCGCATGGCTGGCTGGCGGTCTTTCATTCTGGGCATGGGCCT
TGATCGCGCTAGGTGTTCTTCTGCTGTTGATGCCCTCCGGACTGCCGTTGCGTGCGCTTGGGCTGATAGTGCTGCTGCCG
CTGGCATTTCCTCCGTCGGCATCAGTATCTGACGGGCAGGCACAGGTATGGATGCTGGACGTGGGGCAGGGGCTTTCGGT
ATTGGTGCGAACCCGAAAGCATGCGCTGCTCTACGATGCCGGGCCGAGCCAAGGCGACTTCGACATGGGTGAGCGCGTGG
TCTTTCCTTCACTGCGAGCACTCGGGGTAGATGGGCTGAACATGCTGCTGCTCAGCCATGCCGACAACGACCACGCTGGT
GGTGCGCAGGCTATTCAGCGTTTGATGCCGGTTCATAGTGTCGTCAGTGGCGAGCCGCAACGACATCCCGCCGGCCTCAA
CGCGGAGATGTGCGAAAACGGTGCCGAGTGGCAGTGGGATAACGTGCGCTTCAGGTTGTGGCATTGGCAGGCGGCAGGCG
ATAGCAACCAGAGGTCATGCGTTCTGCTCGTGGAGGCGAACGGAGAAAGGGTTCTGCTTACCGGCGATATCGATCAGGCG
GCGGAGCGGGCATTGCTGCTGAGCGGGCCGGCGGTGCAGGCGCAGTGGCTGTTGCTGCCGCATCACGGCAGCCGAAGCTC
CTCGTCGGAGCCGTTTTTACGTGCTGTTGGGCCTACAGCTGCGCTGATCTCCCGCAGCCTGCACAATGCGTTCGGGCATC
CACACCCGAATGTCATCGCCCGTCTGGAGGCTCTTGGTATCGAGTCGTATGACACCGCCCTGCATGGTGCCGTCCGGATC
GATCTTGGCCGCTTCTCTCCTGCACAGGTGCAGCGCGCAGAACGTCGATTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (23-168)

• Competence protein (Competence) (201-464)

• Metallo-beta-lactamase superfamily (Lactamase_B) (500-683)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	66.389	97.166	0.645
comA	Ralstonia pseudosolanacearum GMI1000	36.173	100	0.372