Detailed information NTG0347290

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: GII81_RS15045
• Genome accession: NZ_CP045820
• Coordinates: 2857646..2858911 (+)
• Length: 421 a.a.
• NCBI ID: WP_015714437.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain MB9_B1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2852646..2863911

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GII81_RS15025 (GII81_15025)	yrrB	2854017..2854637 (-)	621	WP_211197310.1	tetratricopeptide repeat protein	-
GII81_RS15030 (GII81_15030)	mnmA	2854723..2855838 (-)	1116	WP_004398509.1	tRNA 2-thiouridine(34) synthase MnmA	-
GII81_RS15035 (GII81_15035)	iscSA	2855866..2857008 (-)	1143	WP_003229769.1	cysteine desulfurase family protein	-
GII81_RS15040 (GII81_15040)	cymR	2857027..2857443 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
GII81_RS15045 (GII81_15045)	rarA	2857646..2858911 (+)	1266	WP_015714437.1	replication-associated recombination protein A	Machinery gene
GII81_RS15050 (GII81_15050)	tcdA	2858951..2859715 (-)	765	WP_014480428.1	tRNA threonylcarbamoyladenosine dehydratase	-
GII81_RS15060 (GII81_15060)	aspS	2860050..2861828 (-)	1779	WP_003229758.1	aspartate--tRNA ligase	-
GII81_RS15065 (GII81_15065)	hisS	2861842..2863116 (-)	1275	WP_003229755.1	histidine--tRNA ligase	-
GII81_RS15070 (GII81_15070)	yrzK	2863498..2863668 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46500.35 Da
• Isoelectric Point: 7.2043

>NTDB_id=347290 GII81_RS15045 WP_015714437.1 2857646..2858911(+) (rarA) [Bacillus subtilis strain MB9_B1]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=347290 GII81_RS15045 WP_015714437.1 2857646..2858911(+) (rarA) [Bacillus subtilis strain MB9_B1]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGAATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGATCTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCGATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAAGATATCGGTTTAGCAAGCCCGCAAGCCG
GTCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGGGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACAGGAAAATTCGAATCCGCCTTAAAGCAGGTGTACGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.762	100	0.998