Detailed information NTG0346984

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: GII83_RS13895
• Genome accession: NZ_CP045818
• Coordinates: 2681357..2682622 (+)
• Length: 421 a.a.
• NCBI ID: WP_015714437.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain MB9_B6
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2676357..2687622

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GII83_RS13875 (GII83_13875)	yrrB	2677728..2678348 (-)	621	WP_211197310.1	tetratricopeptide repeat protein	-
GII83_RS13880 (GII83_13880)	mnmA	2678434..2679549 (-)	1116	WP_004398509.1	tRNA 2-thiouridine(34) synthase MnmA	-
GII83_RS13885 (GII83_13885)	iscSA	2679577..2680719 (-)	1143	WP_003229769.1	cysteine desulfurase family protein	-
GII83_RS13890 (GII83_13890)	cymR	2680738..2681154 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
GII83_RS13895 (GII83_13895)	rarA	2681357..2682622 (+)	1266	WP_015714437.1	replication-associated recombination protein A	Machinery gene
GII83_RS13900 (GII83_13900)	tcdA	2682662..2683426 (-)	765	WP_014480428.1	tRNA threonylcarbamoyladenosine dehydratase	-
GII83_RS13910 (GII83_13910)	aspS	2683761..2685539 (-)	1779	WP_003229758.1	aspartate--tRNA ligase	-
GII83_RS13915 (GII83_13915)	hisS	2685553..2686827 (-)	1275	WP_003229755.1	histidine--tRNA ligase	-
GII83_RS13920 (GII83_13920)	yrzK	2687209..2687379 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46500.35 Da
• Isoelectric Point: 7.2043

>NTDB_id=346984 GII83_RS13895 WP_015714437.1 2681357..2682622(+) (rarA) [Bacillus subtilis strain MB9_B6]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=346984 GII83_RS13895 WP_015714437.1 2681357..2682622(+) (rarA) [Bacillus subtilis strain MB9_B6]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGAATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGATCTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCGATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAAGATATCGGTTTAGCAAGCCCGCAAGCCG
GTCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGGGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACAGGAAAATTCGAATCCGCCTTAAAGCAGGTGTACGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.762	100	0.998