Detailed information NTG0346683

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: GII86_RS14450
• Genome accession: NZ_CP045816
• Coordinates: 2669019..2670284 (+)
• Length: 421 a.a.
• NCBI ID: WP_015714437.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain P5_B2
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2664019..2675284

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GII86_RS14430 (GII86_14430)	yrrB	2665390..2666010 (-)	621	WP_206697897.1	tetratricopeptide repeat protein	-
GII86_RS14435 (GII86_14435)	mnmA	2666096..2667211 (-)	1116	WP_046160682.1	tRNA 2-thiouridine(34) synthase MnmA	-
GII86_RS14440 (GII86_14440)	iscSA	2667242..2668381 (-)	1140	WP_046160683.1	cysteine desulfurase family protein	-
GII86_RS14445 (GII86_14445)	cymR	2668400..2668816 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
GII86_RS14450 (GII86_14450)	rarA	2669019..2670284 (+)	1266	WP_015714437.1	replication-associated recombination protein A	Machinery gene
GII86_RS14455 (GII86_14455)	tcdA	2670324..2671088 (-)	765	WP_046160684.1	tRNA threonylcarbamoyladenosine dehydratase	-
GII86_RS14465 (GII86_14465)	aspS	2671423..2673201 (-)	1779	WP_015714438.1	aspartate--tRNA ligase	-
GII86_RS14470 (GII86_14470)	hisS	2673215..2674489 (-)	1275	WP_014480430.1	histidine--tRNA ligase	-
GII86_RS14475 (GII86_14475)	yrzK	2674871..2675041 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 421 a.a.
• Molecular weight: 46500.35 Da
• Isoelectric Point: 7.2043

>NTDB_id=346683 GII86_RS14450 WP_015714437.1 2669019..2670284(+) (rarA) [Bacillus subtilis strain P5_B2]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPDLIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDKLMKRK

Nucleotide

• Length: 1266 bp

>NTDB_id=346683 GII86_RS14450 WP_015714437.1 2669019..2670284(+) (rarA) [Bacillus subtilis strain P5_B2]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGGATGATTATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGATTTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCGATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAAGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGGGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACAGGAAAATTCGAATCCGCCTTAAAGCAGGTGTACGATAAATTAATGAAAAGAAAATAA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	99.762	100	0.998