Detailed information
Bioinformatically predicted
Overview
| Name | cinA | Type | Machinery gene |
| Locus tag | LP12_RS08640 | Genome accession | NC_016811 |
| Coordinates | 1929389..1929883 (-) | Length | 164 a.a. |
| NCBI ID | WP_010947530.1 | Uniprot ID | Q5ZUJ4 |
| Organism | Legionella pneumophila subsp. pneumophila ATCC 43290 | ||
| Function | facilitate localization of RecA (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 1924389..1934883
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LP12_RS08625 (lp12_1739) | recX | 1926368..1926820 (-) | 453 | WP_010947526.1 | recombination regulator RecX | - |
| LP12_RS08630 (lp12_1740) | recA | 1926813..1927859 (-) | 1047 | WP_010947527.1 | recombinase RecA | Machinery gene |
| LP12_RS08635 (lp12_1742) | - | 1928162..1929097 (-) | 936 | WP_010947529.1 | lpg1803 family Dot/Icm T4SS effector | - |
| LP12_RS08640 (lp12_1743) | cinA | 1929389..1929883 (-) | 495 | WP_010947530.1 | CinA family protein | Machinery gene |
| LP12_RS08645 | - | 1929960..1930154 (-) | 195 | WP_011946739.1 | hypothetical protein | - |
| LP12_RS08650 (lp12_1744) | mutS | 1930502..1933042 (+) | 2541 | WP_014844166.1 | DNA mismatch repair protein MutS | - |
| LP12_RS08655 (lp12_1745) | - | 1933055..1934743 (+) | 1689 | WP_010947532.1 | autotransporter assembly complex protein TamA | - |
Sequence
Protein
Download Length: 164 a.a. Molecular weight: 17510.09 Da Isoelectric Point: 6.7364
>NTDB_id=34605 LP12_RS08640 WP_010947530.1 1929389..1929883(-) (cinA) [Legionella pneumophila subsp. pneumophila ATCC 43290]
MGHFSILVEEIAAYLKKAKWQLVTAESCTGGLIAACLTEIPGSSNWFERGFVTYSNLAKEEMLAVAHELIQTHGAVSEEV
ALAMAVGALQHSMGNIAVSVTGIAGPEGGSIEKPVGTVCFAWAVHHQFQQTSRQQFTGSRQEIRLSACQYALNGVLSTLK
KVCG
MGHFSILVEEIAAYLKKAKWQLVTAESCTGGLIAACLTEIPGSSNWFERGFVTYSNLAKEEMLAVAHELIQTHGAVSEEV
ALAMAVGALQHSMGNIAVSVTGIAGPEGGSIEKPVGTVCFAWAVHHQFQQTSRQQFTGSRQEIRLSACQYALNGVLSTLK
KVCG
Nucleotide
Download Length: 495 bp
>NTDB_id=34605 LP12_RS08640 WP_010947530.1 1929389..1929883(-) (cinA) [Legionella pneumophila subsp. pneumophila ATCC 43290]
ATGGGTCATTTCTCAATACTGGTTGAAGAAATAGCTGCCTATTTAAAAAAAGCAAAATGGCAATTAGTGACTGCGGAATC
TTGTACAGGAGGTTTAATTGCTGCTTGCCTTACGGAAATACCTGGAAGCTCAAATTGGTTTGAGCGTGGTTTTGTTACTT
ATAGTAATTTAGCTAAAGAGGAAATGCTTGCTGTTGCTCACGAGCTAATACAAACTCATGGGGCAGTCAGTGAAGAAGTG
GCTTTGGCTATGGCTGTTGGTGCGTTACAACATAGTATGGGTAATATCGCTGTATCAGTTACTGGCATCGCAGGTCCAGA
AGGAGGCAGTATTGAAAAACCAGTAGGTACTGTATGCTTTGCCTGGGCAGTTCACCATCAATTTCAACAAACATCAAGAC
AACAATTCACTGGAAGTCGGCAAGAAATACGTTTGTCTGCCTGTCAATATGCTTTAAATGGAGTTCTTTCTACTCTTAAA
AAAGTCTGTGGCTAA
ATGGGTCATTTCTCAATACTGGTTGAAGAAATAGCTGCCTATTTAAAAAAAGCAAAATGGCAATTAGTGACTGCGGAATC
TTGTACAGGAGGTTTAATTGCTGCTTGCCTTACGGAAATACCTGGAAGCTCAAATTGGTTTGAGCGTGGTTTTGTTACTT
ATAGTAATTTAGCTAAAGAGGAAATGCTTGCTGTTGCTCACGAGCTAATACAAACTCATGGGGCAGTCAGTGAAGAAGTG
GCTTTGGCTATGGCTGTTGGTGCGTTACAACATAGTATGGGTAATATCGCTGTATCAGTTACTGGCATCGCAGGTCCAGA
AGGAGGCAGTATTGAAAAACCAGTAGGTACTGTATGCTTTGCCTGGGCAGTTCACCATCAATTTCAACAAACATCAAGAC
AACAATTCACTGGAAGTCGGCAAGAAATACGTTTGTCTGCCTGTCAATATGCTTTAAATGGAGTTCTTTCTACTCTTAAA
AAAGTCTGTGGCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| cinA | Streptococcus pneumoniae R36A |
38.217 |
95.732 |
0.366 |
| cinA | Streptococcus pneumoniae Rx1 |
38.217 |
95.732 |
0.366 |
| cinA | Streptococcus pneumoniae R6 |
38.217 |
95.732 |
0.366 |
| cinA | Streptococcus pneumoniae D39 |
38.217 |
95.732 |
0.366 |