Detailed information    

insolico Bioinformatically predicted

Overview


Name   stkP   Type   Regulator
Locus tag   SSU_RS02075 Genome accession   NC_012925
Coordinates   409899..411557 (+) Length   552 a.a.
NCBI ID   Protein_363    Uniprot ID   -
Organism   Streptococcus suis P1/7     
Function   require for competence development; phosphorylate ComE (predicted from homology)   
Competence regulation

Genomic Context


Location: 404899..416557
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SSU_RS02060 (SSU0381) fmt 406886..407824 (+) 939 WP_011921989.1 methionyl-tRNA formyltransferase -
  SSU_RS02065 (SSU0382) rsmB 407811..409124 (+) 1314 WP_011921990.1 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB -
  SSU_RS02070 (SSU0383) - 409162..409899 (+) 738 WP_012774983.1 Stp1/IreP family PP2C-type Ser/Thr phosphatase -
  SSU_RS02075 (SSU0384) stkP 409899..411557 (+) 1659 Protein_363 Stk1 family PASTA domain-containing Ser/Thr kinase Regulator
  SSU_RS10645 - 411678..411893 (+) 216 Protein_364 serine/threonine protein kinase -
  SSU_RS02080 (SSU0386) liaF 412350..413009 (+) 660 WP_223375661.1 cell wall-active antibiotics response protein LiaF -
  SSU_RS02085 (SSU0387) - 413006..414022 (+) 1017 WP_002937028.1 sensor histidine kinase -
  SSU_RS02090 (SSU0388) - 413994..414635 (+) 642 WP_002937025.1 response regulator transcription factor -
  SSU_RS02095 (SSU0389) - 414685..416085 (+) 1401 WP_011921996.1 bifunctional Cof-type HAD-IIB family hydrolase/peptidylprolyl isomerase -
  SSU_RS02100 (SSU0390) - 416087..416458 (+) 372 WP_011921997.1 S1 RNA-binding domain-containing protein -

Sequence


Protein


Download         Length: 552 a.a.        Molecular weight: Da        Isoelectric Point:

>NTDB_id=34605 SSU_RS02075 Protein_363 409899..411557(+) (stkP) [Streptococcus suis P1/7]
None

Nucleotide


Download         Length: 1659 bp        

>NTDB_id=34605 SSU_RS02075 Protein_363 409899..411557(+) (stkP) [Streptococcus suis P1/7]
ATGATTCAAATCGGTAAGATCTTTGCCGGTCGGTATCGAATCGTTCGGCAAATTGGTCGAGGCGGTATGGCAGATGTTTA
CCTAGCAAGAGATTTGATTTTAGATGGAGAAGAGGTTGCTGTTAAAGTTCTTCGGACCAACTATCAGACAGATCAAATTG
CTATCCAGCGTTTTCAACGTGAAGCGCGTGCCATGGCAGAACTTGACCATCCCAATATCGTTCGTATTTCGGACATCGGT
GAAGAAGATGGTCAACAGTATCTGGCTATGGAATATGTCAATGGCCTCGATTTAAAACGTTATATAAAAGAAAATGCACC
ACTTTCCAACGATGTTGCGGTGCGAATTATGGGACAGATTCTCCTTGCTATGCGCATGGCGCACACGAGAGGAATTGTCC
ATCGAGATTTGAAACCTCAGAACGTCCTTTTGACTTCCAATGGAGTCGCTAAAGTAACAGACTTTGGTATTGCAGTTGCC
TTTGCTGAAACGAGTTTGACACAAACCAACTCCATGTTGGGTTCTGTTCACTATCTTTCACCTGAGCAGGCGCGTGGTTC
GAAAGCGACCATTCAAAGTGATATTTATGCGATGGGAATCATCCTTTTTGAAATGTTGACGGGTCGCATTCCCTATGATG
GAGACAGTGCTGTGACGATCGCTCTTCAGCATTTCCAAAAACCTCTCCCATCTGTTAGAGAAGAGAATGCCAACGTACCT
CAGGCCTTAGAAAATGTTGTACTAAAAGCAACGGCAAAAAAATTAAACGAGCGCTATAAGTCGGTTGCAGAAATGTATGC
AGATTTAGCTTCGGCTCTATCCATGGATCGTCAGAATGAACCCAGGGTTGAACTAGAAGGGAACAAGGTTGATACAAAAA
CCTTGCCGAAACTCTCCCAAGCCAATGTTGAAACGAAAGTACCGCATACAAACAGTTCTGCTCAAGTTTCTGCGACGGAT
AAGGGGTCTGGTAAGAAAGAAGTGGCGAAGTCGGGAAATAAGCCTGTTTCAAAACCAAGGCCAGGCATACGTACACGCTA
CAAAGTCTTGATAGGAGCTATTTTGTTAACAGTCATAGCGGCTGGACTCATGTTTTTCAACACTCCACGAACAGTTACAG
TCCCTGATGTATCTGGTCAAACCGTTGAAAAAGCTACAGAAATGATTGAAGTGGCAGGATTGGAAGTTGGAAATATCACA
GAAGAAGCGACAGCGACTGTAGATGAAGGCTTGGTAATACGGACCTCTCCGGCTGCAAAGACGACCAGACGTCAAGGGAG
TAAGATTGATATTGTAGTAGCAACGGCTGCGCTGGCATCTATTCCAGATGTGGTGGATAAGGAGTCTGATACTGCGCGGC
AGGAATTGGAGGCCCTTGGTTTCCAAGTGACAATAAAAGAAGAATATAGCGAAAAAGTTGCCCAAGGACTCGTTATCAAA
ACAGATCCAGGAGCAAATAGTTCTGCTGAGAAGGGTGCAAAAATTACCCTTTACGTTTCCAAAGGAGTGGCGCCACAAGT
TGTTCCAAACGTTGTTGGAAAAAGTCAGGAGAATGCTACTCAAATTCTTCAGACAGCAGGCTTCAGCATTGGAACCATTA
CTCAGGAATATAGCTCATCTGTTACTGCAGGTCAGGTTATCAGCACAGATCCCGTTGCC

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value