Detailed information
Bioinformatically predicted
Overview
| Name | pilZ | Type | Machinery gene |
| Locus tag | GFD20_RS05475 | Genome accession | NZ_CP045768 |
| Coordinates | 1179244..1179600 (+) | Length | 118 a.a. |
| NCBI ID | WP_003091119.1 | Uniprot ID | A0A0H2ZD30 |
| Organism | Pseudomonas aeruginosa strain CFSAN084950 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1174244..1184600
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GFD20_RS05450 (GFD20_05450) | fabF | 1174456..1175700 (+) | 1245 | WP_023088199.1 | beta-ketoacyl-ACP synthase II | - |
| GFD20_RS05455 (GFD20_05455) | pabC | 1175700..1176515 (+) | 816 | WP_003452483.1 | aminodeoxychorismate lyase | - |
| GFD20_RS05460 (GFD20_05460) | mltG | 1176521..1177570 (+) | 1050 | WP_004350892.1 | endolytic transglycosylase MltG | - |
| GFD20_RS05465 (GFD20_05465) | tmk | 1177599..1178231 (+) | 633 | WP_003091125.1 | dTMP kinase | - |
| GFD20_RS05470 (GFD20_05470) | - | 1178224..1179210 (+) | 987 | WP_003104126.1 | DNA polymerase III subunit delta' | - |
| GFD20_RS05475 (GFD20_05475) | pilZ | 1179244..1179600 (+) | 357 | WP_003091119.1 | PilZ domain-containing protein | Machinery gene |
| GFD20_RS05480 (GFD20_05480) | - | 1179615..1180391 (+) | 777 | WP_003091117.1 | TatD family hydrolase | - |
| GFD20_RS05485 (GFD20_05485) | - | 1180617..1181750 (-) | 1134 | WP_003118082.1 | aminotransferase class V-fold PLP-dependent enzyme | - |
| GFD20_RS05490 (GFD20_05490) | - | 1181836..1182474 (+) | 639 | WP_003091114.1 | TetR/AcrR family transcriptional regulator | - |
| GFD20_RS05495 (GFD20_05495) | - | 1182641..1182763 (+) | 123 | Protein_1089 | radical SAM protein | - |
Sequence
Protein
Download Length: 118 a.a. Molecular weight: 12903.98 Da Isoelectric Point: 9.9969
>NTDB_id=345859 GFD20_RS05475 WP_003091119.1 1179244..1179600(+) (pilZ) [Pseudomonas aeruginosa strain CFSAN084950]
MSLPPNLGPRNGILSLTIKDKSVLYAAYMPFIRNGGLFIPTNKNYKLGDEVFMLLNLMEEPEKIPVAGKVVWITPKGAQG
NRAAGIGVQFNDGDNTARNKIETYLAGALKSDRPTHTM
MSLPPNLGPRNGILSLTIKDKSVLYAAYMPFIRNGGLFIPTNKNYKLGDEVFMLLNLMEEPEKIPVAGKVVWITPKGAQG
NRAAGIGVQFNDGDNTARNKIETYLAGALKSDRPTHTM
Nucleotide
Download Length: 357 bp
>NTDB_id=345859 GFD20_RS05475 WP_003091119.1 1179244..1179600(+) (pilZ) [Pseudomonas aeruginosa strain CFSAN084950]
ATGAGTTTGCCACCCAATCTGGGGCCGCGTAACGGCATCCTGTCCTTGACCATCAAGGACAAGTCCGTGCTGTACGCCGC
CTACATGCCGTTCATCAGGAACGGCGGGCTGTTCATTCCCACCAACAAGAACTACAAGCTCGGCGACGAAGTCTTCATGC
TGCTCAACCTGATGGAAGAGCCGGAGAAGATCCCGGTGGCCGGCAAGGTCGTCTGGATCACCCCGAAGGGCGCCCAGGGC
AACCGTGCGGCGGGCATCGGCGTGCAGTTCAACGACGGTGACAACACCGCCCGCAACAAGATCGAAACCTACCTGGCCGG
GGCGCTGAAGTCGGACCGGCCGACCCACACGATGTAA
ATGAGTTTGCCACCCAATCTGGGGCCGCGTAACGGCATCCTGTCCTTGACCATCAAGGACAAGTCCGTGCTGTACGCCGC
CTACATGCCGTTCATCAGGAACGGCGGGCTGTTCATTCCCACCAACAAGAACTACAAGCTCGGCGACGAAGTCTTCATGC
TGCTCAACCTGATGGAAGAGCCGGAGAAGATCCCGGTGGCCGGCAAGGTCGTCTGGATCACCCCGAAGGGCGCCCAGGGC
AACCGTGCGGCGGGCATCGGCGTGCAGTTCAACGACGGTGACAACACCGCCCGCAACAAGATCGAAACCTACCTGGCCGG
GGCGCTGAAGTCGGACCGGCCGACCCACACGATGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilZ | Legionella pneumophila str. Paris |
49.074 |
91.525 |
0.449 |
| pilZ | Legionella pneumophila strain ERS1305867 |
49.074 |
91.525 |
0.449 |