Detailed information    

insolico Bioinformatically predicted

Overview


Name   dinR/lexA   Type   Regulator
Locus tag   GHR20_RS09765 Genome accession   NZ_CP045740
Coordinates   2345203..2345982 (+) Length   259 a.a.
NCBI ID   WP_037663236.1    Uniprot ID   A0A1X4GW49
Organism   Streptomyces sp. SUK 48     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context


Location: 2340203..2350982
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  - dinR/lexA 2345203..2345982 (+) 780 - - Regulator

Sequence


Protein


Download         Length: 259 a.a.        Molecular weight: 28023.73 Da        Isoelectric Point: 6.9854

>NTDB_id=345710 GHR20_RS09765 WP_037663236.1 2345203..2345982(+) (dinR/lexA) [Streptomyces sp. SUK 48]
MTTTADSATITAQDRSQGRVEPVHAMNEATNPEGPRRSLPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRGYPPSMREI
GQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQAVSVQPTDTSGKPAASYVPLVGRIAAGGPILAEESVED
VFPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKREDGHVWLLPHNAAYEP
IPGDDATILGKVVAVLRRV

Nucleotide


Download         Length: 780 bp        

>NTDB_id=345710 GHR20_RS09765 WP_037663236.1 2345203..2345982(+) (dinR/lexA) [Streptomyces sp. SUK 48]
GTGACCACCACCGCAGACAGTGCCACCATCACCGCCCAGGACCGCTCCCAGGGCCGGGTCGAGCCGGTACATGCGATGAA
CGAAGCCACGAATCCCGAGGGGCCCCGGCGCTCCCTGCCGGGCCGACCTCCAGGCATCCGGGCGGACAGCTCCGGACTCA
CCGACCGGCAGCGCCGGGTGATCGAGGTCATCAGGGACTCCGTGCAGCGGCGCGGGTACCCGCCGTCCATGCGGGAGATC
GGCCAGGCCGTCGGCCTCTCCAGCACCTCCTCCGTGGCGCACCAGCTGATGGCGCTGGAGCGCAAGGGCTTCCTGCGCCG
CGACCCGCACCGCCCGCGCGCCTATGAGGTGCGCGGCTCCGACCAGGCCGTGTCGGTGCAGCCCACGGACACCAGCGGCA
AGCCCGCCGCGTCGTACGTCCCCCTGGTCGGCCGGATCGCCGCCGGTGGGCCGATCCTCGCGGAGGAGTCCGTGGAGGAC
GTCTTCCCGCTCCCCCGCCAGCTGGTCGGCGACGGTGAGCTGTTCGTCCTCAAGGTGGTCGGCGACTCCATGATCGAGGC
CGCGATCTGCGACGGCGACTGGGTCACCGTCCGCCGCCAGCCGGTCGCGGAGAACGGCGACATCGTGGCCGCCATGCTCG
ACGGCGAGGCCACGGTGAAGCGCTTCAAGCGCGAGGACGGCCATGTCTGGCTCCTCCCGCACAACGCGGCCTACGAGCCG
ATCCCCGGCGACGACGCCACCATCCTCGGCAAGGTGGTCGCCGTACTGCGGCGCGTGTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A1X4GW49

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

46.445

81.467

0.378


Multiple sequence alignment