Detailed information NTG0344763

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: FPL20_RS19200
• Genome accession: NZ_CP045478
• Coordinates: 3631290..3632207 (-)
• Length: 305 a.a.
• NCBI ID: WP_003232954.1
• Uniprot ID: A0A9W5LHY5
• Organism: Bacillus subtilis strain JD-014
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 3626290..3637207

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FPL20_RS19175 (FPL20_GE03663)	spx	3626648..3627043 (-)	396	WP_003245483.1	transcriptional regulator Spx	-
FPL20_RS19180 (FPL20_GE03664)	yjbC	3627224..3627802 (-)	579	WP_003244921.1	GNAT family N-acetyltransferase	-
FPL20_RS19185 (FPL20_GE03665)	yjbB	3627966..3629183 (-)	1218	WP_010886478.1	MFS transporter	-
FPL20_RS19190 (FPL20_GE03666)	oppF	3629290..3630207 (-)	918	WP_003245567.1	oligopeptide ABC transporter ATP-binding protein OppF	-
FPL20_RS19195 (FPL20_GE03667)	oppD	3630209..3631285 (-)	1077	WP_014906294.1	oligopeptide ABC transporter ATP-binding protein OppD	-
FPL20_RS19200 (FPL20_GE03668)	amiD	3631290..3632207 (-)	918	WP_003232954.1	oligopeptide ABC transporter permease OppC	Regulator
FPL20_RS19205 (FPL20_GE03669)	oppB	3632211..3633146 (-)	936	WP_003245554.1	oligopeptide ABC transporter permease OppB	-
FPL20_RS19210 (FPL20_GE03670)	oppA	3633254..3634891 (-)	1638	WP_003232957.1	oligopeptide ABC transporter substrate-binding protein OppA	-
FPL20_RS19215 (FPL20_GE03671)	trpS	3635635..3636627 (+)	993	WP_003245134.1	tryptophan--tRNA ligase	-

Sequence

Protein

• Length: 305 a.a.
• Molecular weight: 33621.12 Da
• Isoelectric Point: 10.2873

>NTDB_id=344763 FPL20_RS19200 WP_003232954.1 3631290..3632207(-) (amiD) [Bacillus subtilis strain JD-014]
MQNIPKNMFEPAAANAGDAEKISKKSLSLWKDAMLRFRSNKLAMVGLIIIVLIILMAIFAPMFSRYDYSTTNLLNADKPP
SKDHWFGTDDLGRDIFVRTWVGARISIFIGVAAAVLDLLIGVIWGSISGFRGGRTDEIMMRIADILWAVPSLLMVILLMV
VLPKGLFTIIIAMTITGWINMARIVRGQVLQLKNQEYVLASQTLGAKTSRLLFKHIVPNAMGSILVTMTLTVPTAIFTEA
FLSYLGLGVPAPLASWGTMASDGLPALTYYPWRLFFPAGFICITMFGFNVVGDGLRDALDPKLRK

Nucleotide

• Length: 918 bp

>NTDB_id=344763 FPL20_RS19200 WP_003232954.1 3631290..3632207(-) (amiD) [Bacillus subtilis strain JD-014]
ATGCAGAACATTCCAAAAAACATGTTTGAACCAGCCGCAGCGAATGCCGGCGATGCAGAAAAAATAAGTAAAAAGAGCCT
TTCCCTCTGGAAAGATGCGATGCTTCGCTTCCGCAGCAATAAGCTTGCAATGGTCGGGCTTATCATTATCGTACTTATTA
TCCTTATGGCAATTTTTGCGCCGATGTTCTCAAGGTATGATTATTCAACTACTAATCTCTTAAATGCGGATAAGCCGCCT
TCAAAAGATCACTGGTTCGGAACAGATGATCTTGGACGGGACATTTTCGTCCGTACATGGGTAGGGGCGCGAATCTCAAT
CTTTATCGGTGTTGCAGCTGCTGTTCTCGATTTGCTGATCGGCGTCATTTGGGGGAGCATTTCAGGCTTCCGCGGAGGAA
GAACAGATGAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTTCCTTCATTATTAATGGTTATCTTACTGATGGTT
GTTCTTCCGAAAGGTCTATTTACGATTATTATTGCCATGACGATTACAGGCTGGATTAATATGGCCAGAATCGTGCGCGG
ACAAGTGCTGCAGCTGAAGAATCAGGAGTATGTGCTTGCTTCACAGACACTGGGTGCAAAAACATCCCGTCTTCTATTTA
AACATATCGTGCCAAACGCAATGGGTTCTATTTTGGTCACGATGACACTGACAGTTCCTACTGCGATTTTTACAGAAGCC
TTTTTAAGCTATTTGGGACTTGGTGTTCCGGCTCCGCTGGCAAGCTGGGGAACGATGGCTTCTGACGGATTGCCTGCATT
GACCTATTATCCGTGGCGTTTATTCTTCCCTGCCGGATTTATCTGCATTACAATGTTTGGTTTTAACGTTGTCGGCGACG
GATTAAGAGACGCATTGGATCCTAAGTTACGTAAATAA

Domains

Predicted by InterProScan.

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (121-305)

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-79)

3D structure

• AlphaFold DB: A0A9W5LHY5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus thermophilus LMG 18311	35.922	100	0.364
amiD	Streptococcus thermophilus LMD-9	35.922	100	0.364